myRT

myRT report for GCA_002018615.1_ASM201861v1

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Seq: MKQV01000005.1 Vibrio parahaemolyticus strain PMA1.15 contig05, whole genome shotgun sequence (192738 bp)
Overview 1 RT 1: 19625-29476 bp Neighborhood of RT #1 [19625, 29511] DUF4124 BiPBP_C glnA RVT-GII Intron_maturas2 HNHc PRK05658 dnaG Feature: gene Location: 19625-20205 bp Feature: domain Description: DUF4124 Location: 19670-19835 bp Feature: domain Description: DUF41 24 Location: 1 9670-1 9835 bp Feature: domain Description: BiPBP_C Location: 19895-20111 bp Feature: domain Description: BiPBP_C Location: 1 9895-201 1 1 bp Feature: gene Location: 20404-21813 bp Feature: domain Description: glnA Location: 20407-21811 bp Feature: domain Description: glnA Location: 20407-21 81 1 bp Feature: gene Location: 22954-24822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23224-24043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23224-24043 bp Feature: domain Description: Intron_maturas2 Location: 24145-24469 bp Feature: domain Description: Intron_maturas2 Location: 241 45-24469 bp Feature: domain Description: HNHc Note: nucleases Location: 24601-24760 bp Feature: domain Description: HNHc Note: nucleases Location: 24601 -24760 bp Feature: gene Location: 25789-27651 bp Feature: domain Description: PRK05658 Location: 25795-27649 bp Feature: domain Description: PRK05658 Location: 25795-27649 bp Feature: gene Location: 27751-29511 bp Feature: domain Description: dnaG Location: 27760-29476 bp Feature: domain Description: dnaG Location: 27760-29476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4124 (pfam13511), BiPBP_C (pfam06832), glnA (PRK09469), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK05658 (RNA polymerase sigma factor RpoD; Validated), dnaG (TIGR01391)