myRT

myRT report for GCA_002018815.1_ASM201881v1

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Seq: MWIQ01000037.1 Escherichia coli strain ICBECAM5 Contig_133, whole genome shotgun sequence (45099 bp)
Overview 1 RT 1: 29551-33867 bp Neighborhood of RT #1 [29551, 33875] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 29551-30456 bp Feature: gene Location: 30430-30717 bp Feature: gene Location: 30942-31481 bp Ori: OOW14440.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31272-31350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 272-31 350 bp Feature: gene Location: 31509-32030 bp Ori: OOW14441.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31515-31797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 51 5-31 797 bp Feature: domain Description: GIIM Note: maturase Location: 31845-32025 bp Feature: domain Description: GIIM Note: maturase Location: 31 845-32025 bp Feature: gene Location: 32385-32573 bp Feature: gene Location: 32646-33875 bp Ori: OOW14443.1 Feature: domain Description: YesM Location: 33126-33867 bp Feature: domain Description: YesM Location: 331 26-33867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), YesM (COG2972)

Seq: MWIQ01000049.1 Escherichia coli strain ICBECAM5 Contig_126, whole genome shotgun sequence (33428 bp)
Overview 1 RT 1: 4201-10310 bp Neighborhood of RT #1 [4201, 10369] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 4201-5121 bp Ori: OOW13312.1 Feature: domain Description: AbiEii Location: 4243-4984 bp Feature: domain Description: AbiEii Location: 42 43-4984 bp Feature: gene Location: 5108-5911 bp Ori: OOW13313.1 Feature: domain Description: AbiEi_3_N Location: 5141-5402 bp Feature: domain Description: AbiEi_3_N Location: 5141-5402 bp Feature: domain Description: AbiEi_3 Location: 5414-5870 bp Feature: domain Description: AbiEi_3 Location: 5414-5870 bp Feature: gene Location: 6206-9415 bp Ori: OOW13314.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6734-7223 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6734-72 2 3 bp Feature: domain Description: nitrilase Location: 8729-9326 bp Feature: domain Description: nitrilase Location: 872 9-932 6 bp Feature: gene Location: 9762-10232 bp Feature: gene Location: 10229-10369 bp Ori: OOW13316.1 Feature: domain Description: SfsB Location: 10238-10310 bp Feature: domain Description: SfsB Location: 102 38-10310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), nitrilase (cl11424), SfsB (COG3423)