myRT

myRT report for GCA_002019535.1_ASM201953v1

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Seq: MPNX01000051.1 Solemya velum gill symbiont isolate MA-KB16 KB16_sym_scf50_contig0, whole genome shotgun sequence (2855 bp)
Overview 1 RT 1: 1-2350 bp Neighborhood of RT #1 [1, 2730] RVT-GII Rnase_HI_RT_non_LTR Feature: gene Location: 1-644 bp Feature: gene Location: 646-2730 bp Ori: OOY33764.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 655-1228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 655-1 228 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 1984-2350 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 1 984-2350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Rnase_HI_RT_non_LTR (cd09276)

Seq: MPNX01000077.1 Solemya velum gill symbiont isolate MA-KB16 KB16_sym_scf76_contig0, whole genome shotgun sequence (2785 bp)
Overview 1 RT 1: 1-2355 bp Neighborhood of RT #1 [1, 2771] RNase_HI_RT_Ty3 Integrase_H2C2 RVT-UNC RT_RNaseH_2 retropepsin_like Feature: gene Location: 1-995 bp Ori: OOY33725.1 Feature: domain Description: RNase_HI_RT_Ty3 Location: 7-298 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 7-2 98 bp Feature: domain Description: Integrase_H2C2 Location: 679-844 bp Feature: domain Description: Integrase_H2 C2 Location: 679-844 bp Feature: gene Location: 992-2086 bp Ori: OOY33726.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 1535-1736 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1535-1736 bp Feature: domain Description: RT_RNaseH_2 Location: 1961-2054 bp Feature: domain Description: RT_RNaseH_2 Location: 1961-2 054 bp Feature: gene Location: 2076-2771 bp Ori: OOY33727.1 Feature: domain Description: retropepsin_like Location: 2091-2355 bp Feature: domain Description: retropepsin_like Location: 2 091-2 355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), RVT-UG24/RVT-DGRs/RVT-UG26/RVT-GII(RVT-UNC), RT_RNaseH_2 (pfam17919), retropepsin_like (cd00303)