myRT

myRT report for GCA_002019665.1_ASM201966v1

Download annotations/find similar RTs

Seq: KV917375.1 Bacillus halmapalus strain DSM 8723 genomic scaffold Scaffold1, whole genome shotgun sequence (4700324 bp)
Overview 1 RT 1: 1261421-1264882 bp 2 RT 2: 1738654-1744054 bp 3 RT 3: 1967029-1972250 bp 4 RT 4: 2409498-2413183 bp 5 RT 5: 3045868-3051486 bp 6 RT 6: 3333214-3339625 bp 7 RT 7: 3359037-3363360 bp 8 RT 8: 4058016-4061961 bp Neighborhood of RT #1 [1261421, 1264941] RpmI RplT RVT-GII GIIM YsdA TVP38 Neighborhood of RT #2 [1738654, 1744077] YgaE YkuD_like RVT-GII RVT-GII GIIM Flavin_Reduct YoaI Neighborhood of RT #3 [1967029, 1972285] ADPRase_NUDT5 YqxK RVT-GII GIIM spo_II_M Fur Neighborhood of RT #4 [2409498, 2413188] RVT-GII GIIM PRK13354 Neighborhood of RT #5 [3045868, 3051500] Arsenite_oxidase CeuA RVT-GII GIIM CeuD CeuC Neighborhood of RT #6 [3333214, 3339636] PRK08594 RVT-GII GIIM KefB Na_H_Antiporter_C PRK13625 Neighborhood of RT #7 [3359037, 3363360] Acetyltransf_7 RVT-GII GIIM DUF4015 Neighborhood of RT #8 [4058016, 4061961] HEPN_RES_NTD1 RES SRA RVT-UG2 Feature: gene Location: 1261421-1261621 bp Feature: domain Description: RpmI Location: 1261424-1261610 bp Feature: domain Description: RpmI Location: 1 261 424-1 261 61 0 bp Feature: gene Location: 1261645-1262004 bp Feature: domain Description: RplT Location: 1261648-1261996 bp Feature: domain Description: RplT Location: 1 261 648-1 261 996 bp Feature: gene Location: 1262601-1263860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1262799-1263417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 262799-1 26341 7 bp Feature: domain Description: GIIM Note: maturase Location: 1263465-1263681 bp Feature: domain Description: GIIM Note: maturase Location: 1 263465-1 263681 bp Feature: gene Location: 1264022-1264291 bp Feature: domain Description: YsdA Location: 1264031-1264280 bp Feature: domain Description: YsdA Location: 1 264031 -1 264280 bp Feature: gene Location: 1264354-1264941 bp Feature: domain Description: TVP38 Location: 1264384-1264882 bp Feature: domain Description: TVP38 Location: 1 264384-1 264882 bp Feature: gene Location: 1738654-1739619 bp Feature: domain Description: YgaE Location: 1738657-1739599 bp Feature: domain Description: YgaE Location: 1 738657-1 739599 bp Feature: gene Location: 1739673-1740179 bp Feature: domain Description: YkuD_like Location: 1739757-1740123 bp Feature: domain Description: YkuD_like Location: 1 739757-1 7401 23 bp Feature: gene Location: 1740805-1741884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1741003-1741168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 741 003-1 741 1 68 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1741177-1741441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 741 1 77-1 741 441 bp Feature: domain Description: GIIM Note: maturase Location: 1741489-1741705 bp Feature: domain Description: GIIM Note: maturase Location: 1 741 489-1 741 705 bp Feature: gene Location: 1742101-1742586 bp Feature: domain Description: Flavin_Reduct Location: 1742134-1742542 bp Feature: domain Description: Flavin_Reduct Location: 1 7421 34-1 742542 bp Feature: gene Location: 1742602-1744077 bp Feature: domain Description: YoaI Location: 1742605-1744054 bp Feature: domain Description: YoaI Location: 1 742605-1 744054 bp Feature: gene Location: 1967029-1967580 bp Feature: domain Description: ADPRase_NUDT5 Location: 1967155-1967557 bp Feature: domain Description: ADPRase_NUDT5 Location: 1 9671 55-1 967557 bp Feature: gene Location: 1967590-1968759 bp Feature: domain Description: YqxK Location: 1967605-1968751 bp Feature: domain Description: YqxK Location: 1 967605-1 968751 bp Feature: gene Location: 1969420-1970748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1969675-1970368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 969675-1 970368 bp Feature: domain Description: GIIM Note: maturase Location: 1970449-1970656 bp Feature: domain Description: GIIM Note: maturase Location: 1 970449-1 970656 bp Feature: gene Location: 1971061-1971705 bp Feature: domain Description: spo_II_M Location: 1971094-1971682 bp Feature: domain Description: spo_II_M Location: 1 971 094-1 971 682 bp Feature: gene Location: 1971815-1972285 bp Feature: domain Description: Fur Location: 1971827-1972250 bp Feature: domain Description: Fur Location: 1 971 827-1 972250 bp Feature: gene Location: 2409498-2409629 bp Feature: gene Location: 2409742-2409960 bp Feature: gene Location: 2410352-2411680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2410607-2411300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 0607-241 1 300 bp Feature: domain Description: GIIM Note: maturase Location: 2411381-2411588 bp Feature: domain Description: GIIM Note: maturase Location: 241 1 381 -241 1 588 bp Feature: gene Location: 2411716-2411910 bp Feature: gene Location: 2411941-2413188 bp Feature: domain Description: PRK13354 Location: 2411998-2413183 bp Feature: domain Description: PRK1 3354 Location: 241 1 998-241 31 83 bp Feature: gene Location: 3045868-3046446 bp Feature: domain Description: Arsenite_oxidase Location: 3045889-3046381 bp Feature: domain Description: Arsenite_oxidase Location: 3045889-3046381 bp Feature: gene Location: 3046465-3047439 bp Feature: domain Description: CeuA Location: 3046477-3047437 bp Feature: domain Description: CeuA Location: 3046477-3047437 bp Feature: gene Location: 3047804-3049132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3048059-3048752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3048059-3048752 bp Feature: domain Description: GIIM Note: maturase Location: 3048833-3049040 bp Feature: domain Description: GIIM Note: maturase Location: 3048833-3049040 bp Feature: gene Location: 3049798-3050556 bp Feature: domain Description: CeuD Location: 3049801-3050551 bp Feature: domain Description: CeuD Location: 3049801 -3050551 bp Feature: gene Location: 3050544-3051500 bp Feature: domain Description: CeuC Location: 3050559-3051486 bp Feature: domain Description: CeuC Location: 3050559-3051 486 bp Feature: gene Location: 3333214-3333417 bp Feature: gene Location: 3333450-3334220 bp Feature: domain Description: PRK08594 Location: 3333453-3334218 bp Feature: domain Description: PRK08594 Location: 3333453-333421 8 bp Feature: gene Location: 3334578-3335906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3334833-3335526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3334833-3335526 bp Feature: domain Description: GIIM Note: maturase Location: 3335607-3335814 bp Feature: domain Description: GIIM Note: maturase Location: 3335607-333581 4 bp Feature: gene Location: 3336612-3338675 bp Feature: domain Description: KefB Location: 3336636-3337779 bp Feature: domain Description: KefB Location: 3336636-3337779 bp Feature: domain Description: Na_H_Antiporter_C Location: 3337821-3338208 bp Feature: domain Description: Na_H_Antiporter_C Location: 3337821 -3338208 bp Feature: gene Location: 3338893-3339636 bp Feature: domain Description: PRK13625 Location: 3338899-3339625 bp Feature: domain Description: PRK1 3625 Location: 3338899-3339625 bp Feature: gene Location: 3359037-3359615 bp Feature: domain Description: Acetyltransf_7 Location: 3359184-3359367 bp Feature: domain Description: Acetyltransf_7 Location: 33591 84-3359367 bp Feature: gene Location: 3359777-3359962 bp Feature: gene Location: 3360045-3360779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3360054-3360336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3360054-3360336 bp Feature: domain Description: GIIM Note: maturase Location: 3360384-3360600 bp Feature: domain Description: GIIM Note: maturase Location: 3360384-3360600 bp Feature: gene Location: 3361734-3362936 bp Feature: domain Description: DUF4015 Location: 3361938-3362901 bp Feature: domain Description: DUF401 5 Location: 3361 938-3362901 bp Feature: gene Location: 3363163-3363360 bp Feature: gene Location: 4058016-4059227 bp Feature: domain Description: HEPN_RES_NTD1 Location: 4058139-4058535 bp Feature: domain Description: HEPN_RES_NTD1 Location: 40581 39-4058535 bp Feature: domain Description: RES Location: 4058643-4059144 bp Feature: domain Description: RES Location: 4058643-40591 44 bp Feature: gene Location: 4059257-4060117 bp Feature: domain Description: SRA Location: 4059680-4060097 bp Feature: domain Description: SRA Location: 4059680-4060097 bp Feature: gene Location: 4060217-4061602 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4060487-4061303 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4060487-4061 303 bp Feature: gene Location: 4061675-4061818 bp Feature: gene Location: 4061821-4061961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpmI (COG0291), RplT (COG0292), RVT-GII, GIIM (pfam08388), YsdA (COG3326), TVP38 (COG0398), YgaE (COG4129), YkuD_like (cl21614), Flavin_Reduct (smart00903), YoaI (COG2368)
ADPRase_NUDT5 (cd03424), YqxK (COG1379), spo_II_M (TIGR02831), Fur (COG0735), PRK13354 (tyrosyl-tRNA synthetase; Provisional), Arsenite_oxidase, CeuA (COG4607), CeuD (COG4604), CeuC (COG4605), PRK08594 (enoyl- reductase FabI)
KefB (COG0475), Na_H_Antiporter_C (cd01988), PRK13625 (bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional), Acetyltransf_7 (pfam13508), DUF4015 (pfam13200), HEPN_RES_NTD1 (pfam18870), RES (smart00953), SRA (smart00466), RVT-UG2