myRT

myRT report for GCA_002020225.1_ASM202022v1

Download annotations/find similar RTs

Seq: MPQA01000046.1 Solemya velum gill symbiont isolate RI-PJ36 PJRI36_sym_scf45, whole genome shotgun sequence (2526 bp)
Overview 1 RT 1: 1-2387 bp Neighborhood of RT #1 [1, 2512] RVT-UNC GIY-YIG_PLEs Feature: gene Location: 1-186 bp Feature: gene Location: 626-2512 bp Ori: OOY49272.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 1223-1574 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 223-1 574 bp Feature: domain Description: GIY-YIG_PLEs Location: 2249-2387 bp Feature: domain Description: GIY-YIG_PLEs Location: 2249-2387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-DGRs/RVT-CRISPR(RVT-UNC), GIY-YIG_PLEs (cd10442)

Seq: MPQA01000067.1 Solemya velum gill symbiont isolate RI-PJ36 PJRI36_sym_scf82, whole genome shotgun sequence (1890 bp)
Overview 1 RT 1: 877-1792 bp Neighborhood of RT #1 [877, 1890] RVT-GII Feature: gene Location: 877-1890 bp Ori: OOY49087.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1621-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 1-1792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MPQA01000064.1 Solemya velum gill symbiont isolate RI-PJ36 PJRI36_sym_scf69, whole genome shotgun sequence (2167 bp)
Overview 1 RT 1: 1-2111 bp Neighborhood of RT #1 [1, 2167] Integrase_H2C2 rve RVT-UNC RT_RNaseH_2 Feature: gene Location: 1-1145 bp Ori: OOY49101.1 Feature: domain Description: Integrase_H2C2 Location: 415-580 bp Feature: domain Description: Integrase_H2C2 Location: 415-580 bp Feature: domain Description: rve Location: 646-958 bp Feature: domain Description: rve Location: 646-958 bp Feature: gene Location: 1121-2167 bp Ori: OOY49102.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 1463-1580 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1463 -1580 bp Feature: domain Description: RT_RNaseH_2 Location: 1814-2111 bp Feature: domain Description: RT_RNaseH_2 Location: 1814-2111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_H2C2 (pfam17921), rve (pfam00665), RVT-UNC/RVT-UG25/RVT-UG26/RVT-DGRs(RVT-UNC), RT_RNaseH_2 (pfam17919)