myRT

myRT report for GCA_002020825.1_ASM202082v1

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Seq: MPRA01000052.1 Solemya velum gill symbiont isolate MD-SB7 SB7_sym_scf51, whole genome shotgun sequence (3445 bp)
Overview 1 RT 1: 424-1626 bp Neighborhood of RT #1 [424, 1727] RVT-GII RT_nLTR_like Feature: gene Location: 424-717 bp Ori: OOZ12049.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 544-703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 544-703 bp Feature: gene Location: 624-1727 bp Ori: OOZ12050.1 Feature: domain Description: RT_nLTR_like Location: 1407-1626 bp Feature: domain Description: RT_nLTR_like Location: 1 407-1 626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RT_nLTR_like (cd01650)

Seq: MPRA01000053.1 Solemya velum gill symbiont isolate MD-SB7 SB7_sym_scf52, whole genome shotgun sequence (3350 bp)
Overview 1 RT 1: 191-2556 bp Neighborhood of RT #1 [191, 2681] RVT-UNC GIY-YIG_PLEs Feature: gene Location: 191-385 bp Feature: gene Location: 387-2681 bp Ori: OOZ12048.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 1392-1743 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1392 -1743 bp Feature: domain Description: GIY-YIG_PLEs Location: 2418-2556 bp Feature: domain Description: GIY-YIG_PLEs Location: 2 418-2 556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-DGRs/RVT-CRISPR(RVT-UNC), GIY-YIG_PLEs (cd10442)

Seq: MPRA01000055.1 Solemya velum gill symbiont isolate MD-SB7 SB7_sym_scf54, whole genome shotgun sequence (2982 bp)
Overview 1 RT 1: 240-2238 bp Neighborhood of RT #1 [240, 2669] RVT-UNC Rnase_HI_RT_non_LTR Feature: gene Location: 240-2669 bp Ori: OOZ11989.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 510-1074 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 510-1074 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 1881-2238 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 1881-223 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-Retrons(RVT-UNC), Rnase_HI_RT_non_LTR (cd09276)