myRT

myRT report for GCA_002024965.1_ASM202496v1

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Seq: MIJC01000061.1 Mycobacterium intermedium strain HMC1 PROKKA_contig000061, whole genome shotgun sequence (36707 bp)
Overview 1 RT 1: 123-2882 bp Neighborhood of RT #1 [123, 2882] RVT-GII GIIM InsE Feature: gene Location: 123-1580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444-1134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444-1 1 34 bp Feature: domain Description: GIIM Note: maturase Location: 1209-1428 bp Feature: domain Description: GIIM Note: maturase Location: 1 209-1 428 bp Feature: gene Location: 2160-2540 bp Feature: domain Description: InsE Location: 2163-2487 bp Feature: domain Description: InsE Location: 21 63-2487 bp Feature: gene Location: 2670-2882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: MIJC01000008.1 Mycobacterium intermedium strain HMC1 PROKKA_contig000008, whole genome shotgun sequence (84369 bp)
Overview 1 RT 1: 1209-6211 bp Neighborhood of RT #1 [1209, 6273] SDR_c RVT-GII GIIM Hr-like Tas Feature: gene Location: 1209-1715 bp Feature: gene Location: 1744-2514 bp Feature: domain Description: SDR_c Location: 1759-2449 bp Feature: domain Description: SDR_c Location: 1759-2 449 bp Feature: gene Location: 2628-3941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2877-3492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 877-3492 bp Feature: domain Description: GIIM Note: maturase Location: 3549-3753 bp Feature: domain Description: GIIM Note: maturase Location: 3549-3753 bp Feature: gene Location: 4507-5067 bp Feature: domain Description: Hr-like Location: 4555-4882 bp Feature: domain Description: Hr-like Location: 4555-4882 bp Feature: gene Location: 5305-6273 bp Feature: domain Description: Tas Location: 5338-6211 bp Feature: domain Description: Tas Location: 5338-62 11 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SDR_c (cd05233), RVT-GII, GIIM (pfam08388), Hr-like (cd12108), Tas (COG0667)