myRT

myRT report for GCA_002027345.1_ASM202734v1

Download annotations/find similar RTs

Seq: MTPU01000051.1 Cylindrospermopsis raciborskii CENA302 NODE_51_length_195919_cov_299.462, whole genome shotgun sequence (195919 bp)
Overview 1 RT 1: 29754-35652 bp 2 RT 2: 71549-75049 bp Neighborhood of RT #1 [29754, 35652] DUF3598 RTPR YkfC RVT-GII GIIM RNR_II_monomer Neighborhood of RT #2 [71549, 75060] HEAT CpeS RVT_N RVT-GII GIIM CpeS cyt_b559_alpha Feature: gene Location: 29754-30608 bp Feature: domain Description: DUF3598 Location: 29763-30594 bp Feature: domain Description: DUF3598 Location: 29763-30594 bp Feature: gene Location: 30632-32683 bp Feature: domain Description: RTPR Location: 30638-32657 bp Feature: domain Description: RTPR Location: 30638-32657 bp Feature: gene Location: 32771-34012 bp Feature: domain Description: YkfC Location: 32789-32945 bp Feature: domain Description: YkfC Location: 32789-32945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32948-33554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32948-33554 bp Feature: domain Description: GIIM Note: maturase Location: 33635-33869 bp Feature: domain Description: GIIM Note: maturase Location: 33635-33869 bp Feature: gene Location: 34634-34897 bp Feature: domain Description: RNR_II_monomer Location: 34697-34892 bp Feature: domain Description: RNR_II_monomer Location: 34697-34892 bp Feature: gene Location: 35041-35652 bp Feature: gene Location: 71549-72214 bp Feature: domain Description: HEAT Location: 71561-72197 bp Feature: domain Description: HEAT Location: 71 561 -721 97 bp Feature: gene Location: 72331-72597 bp Feature: domain Description: CpeS Location: 72337-72565 bp Feature: domain Description: CpeS Location: 72337-72565 bp Feature: gene Location: 73120-74241 bp Feature: RT Description: RVT_N Location: 73156-73327 bp Feature: RT Description: RVT_N Location: 731 56-73327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73345-73861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73345-73861 bp Feature: domain Description: GIIM Note: maturase Location: 73921-74113 bp Feature: domain Description: GIIM Note: maturase Location: 73921 -741 1 3 bp Feature: gene Location: 74323-74658 bp Feature: domain Description: CpeS Location: 74329-74605 bp Feature: domain Description: CpeS Location: 74329-74605 bp Feature: gene Location: 74812-75060 bp Feature: domain Description: cyt_b559_alpha Location: 74818-75049 bp Feature: domain Description: cyt_b559_alpha Location: 7481 8-75049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3598 (pfam12204), RTPR (TIGR02505), YkfC (COG3344), RVT-GII, GIIM (pfam08388), RNR_II_monomer (cd01676), HEAT (sd00044), CpeS (pfam09367), RVT_N (pfam13655), cyt_b559_alpha (TIGR01332)

Seq: MTPU01000012.1 Cylindrospermopsis raciborskii CENA302 NODE_128_length_93916_cov_305.401, whole genome shotgun sequence (93916 bp)
Overview 1 RT 1: 40406-45702 bp Neighborhood of RT #1 [40406, 45710] N_methyl Pilin_GH KOG0404 RVT_N RVT-GII GIIM KOG0404 TRX_NTR DppC Feature: gene Location: 40406-40930 bp Feature: domain Description: N_methyl Location: 40466-40535 bp Feature: domain Description: N_methyl Location: 40466-40535 bp Feature: domain Description: Pilin_GH Location: 40571-40898 bp Feature: domain Description: Pilin_GH Location: 40571-40898 bp Feature: gene Location: 41162-41332 bp Feature: domain Description: KOG0404 Location: 41174-41321 bp Feature: domain Description: KOG0404 Location: 41174-4132 1 bp Feature: gene Location: 41968-43434 bp Feature: RT Description: RVT_N Location: 42052-42235 bp Feature: RT Description: RVT_N Location: 42 052 -42 2 35 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42316-42940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 316-42 940 bp Feature: domain Description: GIIM Note: maturase Location: 43084-43309 bp Feature: domain Description: GIIM Note: maturase Location: 43084-43309 bp Feature: gene Location: 43640-44794 bp Feature: domain Description: KOG0404 Location: 43643-44375 bp Feature: domain Description: KOG0404 Location: 43643-44375 bp Feature: domain Description: TRX_NTR Location: 44495-44780 bp Feature: domain Description: TRX_NTR Location: 44495-44780 bp Feature: gene Location: 44850-45710 bp Feature: domain Description: DppC Location: 44886-45702 bp Feature: domain Description: DppC Location: 44886-45702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N_methyl (pfam07963), Pilin_GH (pfam16734), KOG0404 (KOG0404, Thioredoxin reductase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TRX_NTR (cd02949), DppC (COG1173)

Seq: MTPU01000036.1 Cylindrospermopsis raciborskii CENA302 NODE_33_length_271414_cov_296.988, whole genome shotgun sequence (271414 bp)
Overview 1 RT 1: 42444-49046 bp Neighborhood of RT #1 [42444, 49060] MviM QueC RVT_N RVT-GII GIIM DUF3157 TlyC Feature: gene Location: 42444-43523 bp Feature: domain Description: MviM Location: 42510-43461 bp Feature: domain Description: MviM Location: 42510-43 461 bp Feature: gene Location: 43723-44403 bp Feature: domain Description: QueC Location: 43726-44389 bp Feature: domain Description: QueC Location: 43 726-443 89 bp Feature: gene Location: 44536-46212 bp Feature: RT Description: RVT_N Location: 44563-44791 bp Feature: RT Description: RVT_N Location: 44563 -44791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44827-45487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44827-45487 bp Feature: domain Description: GIIM Note: maturase Location: 45589-45820 bp Feature: domain Description: GIIM Note: maturase Location: 45589-45820 bp Feature: gene Location: 46878-47582 bp Feature: domain Description: DUF3157 Location: 47259-47409 bp Feature: domain Description: DUF3 157 Location: 47259-47409 bp Feature: gene Location: 47678-49060 bp Feature: domain Description: TlyC Location: 47717-49046 bp Feature: domain Description: TlyC Location: 47717-49046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), QueC (pfam06508), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3157 (pfam11355), TlyC (COG1253)