myRT

myRT report for GCA_002029035.1_ASM202903v1

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Seq: MDGF01000027.1 Escherichia coli strain SF-383 Contig_7_SF-383, whole genome shotgun sequence (396070 bp)
Overview 1 RT 1: 16504-22898 bp Neighborhood of RT #1 [16504, 22921] PFLE_PFLC RVT-GII RVT-GII GIIM YesM YesN YesN Feature: gene Location: 16504-17421 bp Ori: OPJ14309.1 Feature: domain Description: PFLE_PFLC Location: 16540-17395 bp Feature: domain Description: PFLE_PFLC Location: 1 6540-1 7395 bp Feature: gene Location: 17558-18463 bp Feature: gene Location: 18949-19488 bp Ori: OPJ14311.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19279-19357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9279-1 9357 bp Feature: gene Location: 19555-20037 bp Ori: OPJ14655.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19564-19804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9564-1 9804 bp Feature: domain Description: GIIM Note: maturase Location: 19852-20032 bp Feature: domain Description: GIIM Note: maturase Location: 1 9852-20032 bp Feature: gene Location: 20620-21849 bp Ori: OPJ14312.1 Feature: domain Description: YesM Location: 21100-21841 bp Feature: domain Description: YesM Location: 21 1 00-21 841 bp Feature: gene Location: 21866-22921 bp Ori: OPJ14313.1 Feature: domain Description: YesN Location: 21869-22259 bp Feature: domain Description: YesN Location: 21 869-22259 bp Feature: domain Description: YesN Location: 22601-22898 bp Feature: domain Description: YesN Location: 22601 -22898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFLE_PFLC (TIGR02494), RVT-GII, GIIM (pfam08388), YesM (COG2972), YesN (COG4753)

Seq: MDGF01000005.1 Escherichia coli strain SF-383 Contig_14_SF-383, whole genome shotgun sequence (37372 bp)
Overview 1 RT 1: 19539-22990 bp Neighborhood of RT #1 [19539, 22990] InsE Tra5 RVT-GII GIIM Feature: gene Location: 19539-19838 bp Ori: OPJ24318.1 Feature: domain Description: InsE Location: 19566-19833 bp Feature: domain Description: InsE Location: 19566-19833 bp Feature: gene Location: 19835-20573 bp Feature: domain Description: Tra5 Location: 19946-20456 bp Feature: domain Description: Tra5 Location: 19946-2 0456 bp Feature: gene Location: 20802-22310 bp Ori: OPJ24336.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21060-21792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1060-2 1792 bp Feature: domain Description: GIIM Note: maturase Location: 21867-22065 bp Feature: domain Description: GIIM Note: maturase Location: 2 1867-2 2 065 bp Feature: gene Location: 22279-22704 bp Feature: gene Location: 22619-22990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), Tra5 (COG2801), RVT-GII, GIIM (pfam08388)