myRT

myRT report for GCA_002029965.1_ASM202996v1

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Seq: LQBF01000004.1 Delta proteobacterium ML8_D scaffold_11, whole genome shotgun sequence (139905 bp)
Overview 1 RT 1: 6730-10787 bp Neighborhood of RT #1 [6730, 10876] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR Cmr6 Feature: gene Location: 6730-7005 bp Ori: OPL17077.1 Feature: domain Description: Cas2_I_II_III Location: 6739-6970 bp Feature: domain Description: Cas2_I_II_III Location: 6739-6970 bp Feature: gene Location: 7366-8367 bp Ori: OPL17078.1 Feature: domain Description: Cas1_I-II-III Location: 7375-8332 bp Feature: domain Description: Cas1 _I-II-III Location: 7375-8332 bp Feature: gene Location: 8370-9293 bp Ori: OPL17190.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8568-9165 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8568-91 65 bp Feature: gene Location: 9302-9913 bp Feature: gene Location: 9992-10876 bp Ori: OPL17080.1 Feature: domain Description: Cmr6 Location: 10193-10787 bp Feature: domain Description: Cmr6 Location: 1 01 93-1 0787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR, Cmr6 (COG1604)

Seq: LQBF01000023.1 Delta proteobacterium ML8_D scaffold_29, whole genome shotgun sequence (82941 bp)
Overview 1 RT 1: 24323-29334 bp Neighborhood of RT #1 [24323, 29339] RVT_N RVT-GII GIIM RVT-GII RelB YafQ_toxin Feature: gene Location: 24323-25210 bp Feature: gene Location: 25327-26001 bp Feature: gene Location: 26579-28072 bp Ori: OPL14555.1 Feature: domain Description: RVT_N Location: 26660-26903 bp Feature: domain Description: RVT_N Location: 2 6660-2 6903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26948-27572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6948-2 7572 bp Feature: domain Description: GIIM Note: maturase Location: 27629-27857 bp Feature: domain Description: GIIM Note: maturase Location: 2 762 9-2 7857 bp Feature: gene Location: 28158-28583 bp Ori: OPL14556.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28164-28305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8164-2 8305 bp Feature: gene Location: 28807-29067 bp Ori: OPL14557.1 Feature: domain Description: RelB Location: 28810-29062 bp Feature: domain Description: RelB Location: 2 8810-2 9062 bp Feature: gene Location: 29067-29339 bp Ori: OPL14558.1 Feature: domain Description: YafQ_toxin Location: 29082-29334 bp Feature: domain Description: YafQ_toxin Location: 2 9082 -2 9334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RelB (pfam04221), YafQ_toxin (pfam15738)

Seq: LQBF01000010.1 Delta proteobacterium ML8_D scaffold_17, whole genome shotgun sequence (55220 bp)
Overview 1 RT 1: 227-2261 bp Neighborhood of RT #1 [227, 2278] RVT-GII BrnT_toxin BrnA_antitoxin Feature: gene Location: 227-733 bp Feature: gene Location: 920-1267 bp Ori: OPL16434.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1064-1253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1064-1253 bp Feature: gene Location: 1783-2073 bp Ori: OPL16435.1 Feature: domain Description: BrnT_toxin Location: 1810-2035 bp Feature: domain Description: BrnT_toxin Location: 1810-203 5 bp Feature: gene Location: 2048-2278 bp Ori: OPL16436.1 Feature: domain Description: BrnA_antitoxin Location: 2090-2261 bp Feature: domain Description: BrnA_antitoxin Location: 2090-2261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, BrnT_toxin (pfam04365), BrnA_antitoxin (pfam14384)