myRT

myRT report for GCA_002030375.1_ASM203037v1

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Seq: MXET01000297.1 Salmonella enterica subsp. enterica serovar Typhimurium strain BCW_2215 NODE_297_length_4443_cov_121.318, whole genome shotgun sequence (4443 bp)
Overview 1 RT 1: 1-1501 bp 2 RT 2: 3634-4440 bp Neighborhood of RT #1 [1, 1501] RVT-Retrons CspC Neighborhood of RT #2 [3634, 4442] RVT-Retrons Feature: gene Location: 1-834 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7-394 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7-394 bp Feature: gene Location: 839-1042 bp Feature: domain Description: CspC Location: 842-1037 bp Feature: domain Description: CspC Location: 842-1 037 bp Feature: gene Location: 1301-1501 bp Feature: gene Location: 3634-3789 bp Feature: gene Location: 3879-4061 bp Feature: gene Location: 4083-4442 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4227-4440 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4227-4440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CspC (COG1278)

Seq: MXET01000087.1 Salmonella enterica subsp. enterica serovar Typhimurium strain BCW_2215 NODE_87_length_7853_cov_5.07207, whole genome shotgun sequence (7853 bp)
Overview 1 RT 1: 167-4343 bp Neighborhood of RT #1 [167, 4343] PRK10473 RVT-Retrons Feature: gene Location: 167-1354 bp Feature: domain Description: PRK10473 Location: 170-1346 bp Feature: domain Description: PRK10473 Location: 170-1346 bp Feature: gene Location: 1699-1908 bp Feature: gene Location: 2156-3091 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2267-2852 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 67-2 852 bp Feature: gene Location: 3091-4053 bp Feature: gene Location: 4080-4343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons