myRT

myRT report for GCA_002031345.1_ASM203134v1

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Seq: MXGK01000021.1 Salmonella enterica subsp. enterica serovar Kentucky strain N29359 NODE_21_length_86305_cov_3.03407, whole genome shotgun sequence (86305 bp)
Overview 1 RT 1: 31678-36390 bp Neighborhood of RT #1 [31678, 36398] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 31678-32187 bp Feature: domain Description: INT_P4_C Location: 31681-32116 bp Feature: domain Description: INT_P4_C Location: 31 681 -321 1 6 bp Feature: gene Location: 32512-33474 bp Feature: gene Location: 33474-34409 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33585-34170 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33585-341 70 bp Feature: gene Location: 34657-34866 bp Feature: gene Location: 35211-36398 bp Feature: domain Description: PRK10473 Location: 35214-36390 bp Feature: domain Description: PRK1 0473 Location: 3521 4-36390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)

Seq: MXGK01000003.1 Salmonella enterica subsp. enterica serovar Kentucky strain N29359 NODE_3_length_320620_cov_2.97315, whole genome shotgun sequence (320620 bp)
Overview 1 RT 1: 232135-235624 bp Neighborhood of RT #1 [232135, 235624] DUF4156 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 232135-232500 bp Feature: domain Description: DUF4156 Location: 232216-232492 bp Feature: domain Description: DUF4156 Location: 2 32 2 16-2 32 492 bp Feature: gene Location: 232842-233165 bp Feature: gene Location: 233170-234867 bp Feature: RT Description: RVT_N Location: 233233-233467 bp Feature: RT Description: RVT_N Location: 2 332 33-2 33467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 233521-234166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3352 1-2 34166 bp Feature: domain Description: GIIM Note: maturase Location: 234220-234451 bp Feature: domain Description: GIIM Note: maturase Location: 2 342 2 0-2 34451 bp Feature: domain Description: HNHc Note: nucleases Location: 234661-234817 bp Feature: domain Description: HNHc Note: nucleases Location: 2 34661-2 34817 bp Feature: gene Location: 235005-235241 bp Feature: gene Location: 235298-235624 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4156 (pfam13698), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)