myRT

myRT report for GCA_002032155.1_ASM203215v1

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Seq: MXIT01000017.1 Salmonella enterica subsp. enterica serovar Oranienburg strain BCW_2047 NODE_17_length_82652_cov_3.11705, whole genome shotgun sequence (82652 bp)
Overview 1 RT 1: 31643-37087 bp Neighborhood of RT #1 [31643, 37095] PRK09692 RVT-Retrons PRK10473 Feature: gene Location: 31643-32785 bp Feature: domain Description: PRK09692 Location: 31664-32723 bp Feature: domain Description: PRK09692 Location: 31 664-32723 bp Feature: gene Location: 33110-34072 bp Feature: gene Location: 34072-35007 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34183-34768 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 341 83-34768 bp Feature: gene Location: 35265-35393 bp Feature: gene Location: 35908-37095 bp Feature: domain Description: PRK10473 Location: 35911-37087 bp Feature: domain Description: PRK1 0473 Location: 3591 1 -37087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)

Seq: MXIT01000002.1 Salmonella enterica subsp. enterica serovar Oranienburg strain BCW_2047 NODE_2_length_373951_cov_3.15361, whole genome shotgun sequence (373951 bp)
Overview 1 RT 1: 233228-239134 bp Neighborhood of RT #1 [233228, 239134] HTH_36 RVT-AbiP2 DUF4062 Feature: gene Location: 233228-233683 bp Feature: gene Location: 234563-235072 bp Feature: domain Description: HTH_36 Location: 234749-234893 bp Feature: domain Description: HTH_36 Location: 2 34749-2 34893 bp Feature: gene Location: 235280-236779 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 235712-236168 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 35712 -2 36168 bp Feature: gene Location: 237178-238515 bp Feature: domain Description: DUF4062 Location: 237211-237454 bp Feature: domain Description: DUF4062 Location: 2 372 11-2 37454 bp Feature: gene Location: 238553-239134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-AbiP2, DUF4062 (pfam13271)

Seq: MXIT01000007.1 Salmonella enterica subsp. enterica serovar Oranienburg strain BCW_2047 NODE_7_length_264056_cov_3.04007, whole genome shotgun sequence (264056 bp)
Overview 1 RT 1: 63790-70095 bp Neighborhood of RT #1 [63790, 70097] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 63790-65490 bp Feature: domain Description: 5 Location: 65014-65308 bp Feature: domain Description: 5 Location: 65014-653 08 bp Feature: gene Location: 65620-65787 bp Feature: gene Location: 66397-67161 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 66520-66973 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 66520-66973 bp Feature: gene Location: 67485-67991 bp Feature: domain Description: PRK10201 Location: 67488-67986 bp Feature: domain Description: PRK10201 Location: 67488-67986 bp Feature: gene Location: 68115-70097 bp Feature: domain Description: PRK05658 Location: 68253-70095 bp Feature: domain Description: PRK05658 Location: 68253 -70095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)