myRT

myRT report for GCA_002043255.1_ASM204325v1

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Seq: MYUR01000004.1 Salmonella enterica strain BCW_6510 NODE_4_length_317314_cov_4.30796, whole genome shotgun sequence (317314 bp)
Overview 1 RT 1: 7296-13186 bp Neighborhood of RT #1 [7296, 13188] HTH_Hin_like HTH_Tnp_1 RVT-Retrons TIR_2 Prim_Zn_Ribbon COG3378 DUF5375 Feature: gene Location: 7296-7427 bp Feature: domain Description: HTH_Hin_like Location: 7302-7407 bp Feature: domain Description: HTH_Hin_like Location: 7302-7407 bp Feature: gene Location: 7813-8250 bp Feature: domain Description: HTH_Tnp_1 Location: 7828-7945 bp Feature: domain Description: HTH_Tnp_1 Location: 7828-7945 bp Feature: gene Location: 8300-9931 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8615-9212 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 861 5-921 2 bp Feature: domain Description: TIR_2 Location: 9536-9896 bp Feature: domain Description: TIR_2 Location: 9536-9896 bp Feature: gene Location: 10520-12853 bp Feature: domain Description: Prim_Zn_Ribbon Location: 10610-10718 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1 061 0-1 071 8 bp Feature: domain Description: COG3378 Location: 11336-12845 bp Feature: domain Description: COG3378 Location: 1 1 336-1 2845 bp Feature: gene Location: 12868-13188 bp Feature: domain Description: DUF5375 Location: 12871-13186 bp Feature: domain Description: DUF5375 Location: 1 2871 -1 31 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), DUF5375 (pfam17345), HTH_Hin_like (cd00569), HTH_Tnp_1 (pfam01527), RVT-Retrons, TIR_2 (pfam13676)