myRT

myRT report for GCA_002046245.1_ASM204624v1

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Seq: MZAF01000003.1 Salmonella enterica subsp. enterica serovar Lomalinda strain 02-0589 NODE_3_length_144486_cov_5.52753, whole genome shotgun sequence (144486 bp)
Overview 1 RT 1: 9673-16189 bp Neighborhood of RT #1 [9673, 16191] COG3950 RVT-Retrons TIR_2 Prim_Zn_Ribbon COG3378 DUF5375 Feature: gene Location: 9673-9849 bp Feature: domain Description: COG3950 Location: 9676-9832 bp Feature: domain Description: COG3950 Location: 9676-9832 bp Feature: gene Location: 10528-10872 bp Feature: gene Location: 11303-12934 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11618-12215 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 61 8-1 221 5 bp Feature: domain Description: TIR_2 Location: 12539-12899 bp Feature: domain Description: TIR_2 Location: 1 2539-1 2899 bp Feature: gene Location: 13523-15856 bp Feature: domain Description: Prim_Zn_Ribbon Location: 13613-13721 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1 361 3-1 3721 bp Feature: domain Description: COG3378 Location: 14330-15845 bp Feature: domain Description: COG3378 Location: 1 4330-1 5845 bp Feature: gene Location: 15871-16191 bp Feature: domain Description: DUF5375 Location: 15874-16189 bp Feature: domain Description: DUF5375 Location: 1 5874-1 61 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), DUF5375 (pfam17345)