myRT

myRT report for GCA_002046525.1_ASM204652v1

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Seq: MZAU01000006.1 Salmonella enterica subsp. enterica serovar Lomalinda strain 2010K-0199 NODE_6_length_170285_cov_4.86234, whole genome shotgun sequence (170285 bp)
Overview 1 RT 1: 35187-41703 bp Neighborhood of RT #1 [35187, 41705] COG3950 RVT-Retrons TIR_2 Prim_Zn_Ribbon COG3378 DUF5375 Feature: gene Location: 35187-35363 bp Feature: domain Description: COG3950 Location: 35190-35346 bp Feature: domain Description: COG3950 Location: 351 90-35346 bp Feature: gene Location: 36042-36386 bp Feature: gene Location: 36817-38448 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37132-37729 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 371 32-37729 bp Feature: domain Description: TIR_2 Location: 38053-38413 bp Feature: domain Description: TIR_2 Location: 38053-3841 3 bp Feature: gene Location: 39037-41370 bp Feature: domain Description: Prim_Zn_Ribbon Location: 39127-39235 bp Feature: domain Description: Prim_Zn_Ribbon Location: 391 27-39235 bp Feature: domain Description: COG3378 Location: 39844-41359 bp Feature: domain Description: COG3378 Location: 39844-41 359 bp Feature: gene Location: 41385-41705 bp Feature: domain Description: DUF5375 Location: 41388-41703 bp Feature: domain Description: DUF5375 Location: 41 388-41 703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, TIR_2 (pfam13676), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), DUF5375 (pfam17345)