myRT

myRT report for GCA_002047205.1_ASM204720v1

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Seq: MZCU01000038.1 Salmonella enterica subsp. enterica serovar Telelkebir strain 76-0298 NODE_38_length_27839_cov_5.00861, whole genome shotgun sequence (27839 bp)
Overview 1 RT 1: 1542-3572 bp Neighborhood of RT #1 [1542, 3572] DDE_Tnp_IS66 RVT-GII DEDD_Tnp_IS110 Feature: gene Location: 1542-1985 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1710-1977 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 71 0-1 977 bp Feature: gene Location: 1995-2219 bp Feature: gene Location: 2228-2461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2240-2387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2240-2387 bp Feature: gene Location: 2701-2937 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 2743-2791 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 2743-2791 bp Feature: gene Location: 3396-3572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, DEDD_Tnp_IS110 (pfam01548)

Seq: MZCU01000041.1 Salmonella enterica subsp. enterica serovar Telelkebir strain 76-0298 NODE_41_length_22167_cov_4.56354, whole genome shotgun sequence (22167 bp)
Overview 1 RT 1: 254-3303 bp Neighborhood of RT #1 [254, 3326] RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 254-571 bp Feature: gene Location: 681-830 bp Feature: gene Location: 917-2590 bp Feature: domain Description: RVT_N Location: 977-1217 bp Feature: domain Description: RVT_N Location: 977-12 17 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1265-1907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 65-1907 bp Feature: domain Description: YkfC Location: 2036-2210 bp Feature: domain Description: YkfC Location: 2 036-2 2 10 bp Feature: domain Description: HNHc Note: nucleases Location: 2405-2567 bp Feature: domain Description: HNHc Note: nucleases Location: 2 405-2 567 bp Feature: gene Location: 2609-2764 bp Feature: gene Location: 3147-3326 bp Feature: domain Description: PRK09738 Location: 3150-3303 bp Feature: domain Description: PRK09738 Location: 3150-3303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)