myRT

myRT report for GCA_002049445.1_ASM204944v1

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Seq: MZGD01000032.1 Salmonella enterica subsp. enterica serovar Gaminara strain 66-5257 NODE_32_length_48279_cov_2.39285, whole genome shotgun sequence (48279 bp)
Overview 1 RT 1: 25187-31753 bp Neighborhood of RT #1 [25187, 31770] HTH_XRE PRK09738 RVT_N RVT-GII YkfC HNHc FimD FimC Feature: gene Location: 25187-25456 bp Feature: domain Description: HTH_XRE Location: 25202-25304 bp Feature: domain Description: HTH_XRE Location: 25202-25304 bp Feature: gene Location: 25951-26130 bp Feature: domain Description: PRK09738 Location: 25954-26107 bp Feature: domain Description: PRK09738 Location: 25954-261 07 bp Feature: gene Location: 26687-28360 bp Feature: RT Description: RVT_N Location: 26747-26990 bp Feature: RT Description: RVT_N Location: 26747-26990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27035-27677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27035-27677 bp Feature: domain Description: YkfC Location: 27806-27977 bp Feature: domain Description: YkfC Location: 27806-27977 bp Feature: domain Description: HNHc Note: nucleases Location: 28175-28337 bp Feature: domain Description: HNHc Note: nucleases Location: 281 75-28337 bp Feature: gene Location: 28646-31123 bp Feature: domain Description: FimD Location: 28721-31118 bp Feature: domain Description: FimD Location: 28721 -31 1 1 8 bp Feature: gene Location: 31285-31770 bp Feature: domain Description: FimC Location: 31300-31753 bp Feature: domain Description: FimC Location: 31 300-31 753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), PRK09738 (small toxic polypeptide; Provisional), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), FimD (COG3188), FimC (COG3121)