myRT

myRT report for GCA_002050685.1_ASM205068v1

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Seq: MYGI01000001.1 Salmonella enterica subsp. enterica serovar Muenster strain 07-0237 NODE_1_length_425940_cov_4.68345, whole genome shotgun sequence (425940 bp)
Overview 1 RT 1: 59505-64876 bp Neighborhood of RT #1 [59505, 64881] HTH_Tnp_1 RVT-Retrons TIR_2 Prim_Zn_Ribbon COG3378 DUF5375 Feature: gene Location: 59505-59702 bp Feature: domain Description: HTH_Tnp_1 Location: 59520-59637 bp Feature: domain Description: HTH_Tnp_1 Location: 59520-59637 bp Feature: gene Location: 59718-59915 bp Feature: gene Location: 59993-61624 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60308-60905 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60308-60905 bp Feature: domain Description: TIR_2 Location: 61229-61589 bp Feature: domain Description: TIR_2 Location: 61 229-61 589 bp Feature: gene Location: 62213-64546 bp Feature: domain Description: Prim_Zn_Ribbon Location: 62303-62411 bp Feature: domain Description: Prim_Zn_Ribbon Location: 62303-6241 1 bp Feature: domain Description: COG3378 Location: 63029-64538 bp Feature: domain Description: COG3378 Location: 63029-64538 bp Feature: gene Location: 64561-64881 bp Feature: domain Description: DUF5375 Location: 64564-64876 bp Feature: domain Description: DUF5375 Location: 64564-64876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-Retrons, TIR_2 (pfam13676), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), DUF5375 (pfam17345)