myRT

myRT report for GCA_002051365.1_ASM205136v1

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Seq: MYHQ01000033.1 Salmonella enterica strain BCW_5880 NODE_33_length_53686_cov_4.38886, whole genome shotgun sequence (53686 bp)
Overview 1 RT 1: 44603-48779 bp Neighborhood of RT #1 [44603, 48779] PRK10473 RVT-Retrons Feature: gene Location: 44603-45790 bp Feature: domain Description: PRK10473 Location: 44606-45782 bp Feature: domain Description: PRK1 0473 Location: 44606-45782 bp Feature: gene Location: 46135-46344 bp Feature: gene Location: 46592-47527 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46703-47288 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46703-47288 bp Feature: gene Location: 47527-48489 bp Feature: gene Location: 48516-48779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons

Seq: MYHQ01000054.1 Salmonella enterica strain BCW_5880 NODE_54_length_8995_cov_3.51133, whole genome shotgun sequence (8995 bp)
Overview 1 RT 1: 4998-8930 bp Neighborhood of RT #1 [4998, 8930] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 4998-5231 bp Feature: domain Description: DUF905 Location: 5028-5226 bp Feature: domain Description: DUF905 Location: 502 8-52 2 6 bp Feature: gene Location: 5289-5729 bp Feature: domain Description: PRK13732 Location: 5295-5727 bp Feature: domain Description: PRK13732 Location: 52 95-572 7 bp Feature: gene Location: 5924-7825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6191-7022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6191-702 2 bp Feature: domain Description: Intron_maturas2 Location: 7136-7394 bp Feature: domain Description: Intron_maturas2 Location: 7136-7394 bp Feature: domain Description: HNHc Note: nucleases Location: 7568-7730 bp Feature: domain Description: HNHc Note: nucleases Location: 7568-7730 bp Feature: gene Location: 8388-8930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)