myRT

myRT report for GCA_002051945.1_ASM205194v1

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Seq: MYIQ01000120.1 Salmonella enterica strain BCW_5850 NODE_120_length_9299_cov_4.71395, whole genome shotgun sequence (9299 bp)
Overview 1 RT 1: 3-6083 bp Neighborhood of RT #1 [3, 6265] PRK05658 PRK10201 RVT-UG11 5 Feature: gene Location: 3-1940 bp Feature: domain Description: PRK05658 Location: 96-1938 bp Feature: domain Description: PRK05658 Location: 96-1 938 bp Feature: gene Location: 2064-2570 bp Feature: domain Description: PRK10201 Location: 2067-2565 bp Feature: domain Description: PRK1 0201 Location: 2067-2565 bp Feature: gene Location: 2894-3658 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3017-3470 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 301 7-3470 bp Feature: gene Location: 4268-4435 bp Feature: gene Location: 4565-6265 bp Feature: domain Description: 5 Location: 5789-6083 bp Feature: domain Description: 5 Location: 5789-6083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10201 (G/U mismatch-specific DNA glycosylase), RVT-UG11, 5 (PHA02596)

Seq: MYIQ01000002.1 Salmonella enterica strain BCW_5850 NODE_2_length_63027_cov_4.99628, whole genome shotgun sequence (63027 bp)
Overview 1 RT 1: 30114-35039 bp Neighborhood of RT #1 [30114, 35047] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 30114-30836 bp Feature: domain Description: INT_P4_C Location: 30234-30765 bp Feature: domain Description: INT_P4_C Location: 302 34-30765 bp Feature: gene Location: 31161-32123 bp Feature: gene Location: 32123-33058 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32234-32819 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 2 34-32 819 bp Feature: gene Location: 33306-33515 bp Feature: gene Location: 33860-35047 bp Feature: domain Description: PRK10473 Location: 33863-35039 bp Feature: domain Description: PRK10473 Location: 33863-35039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)