myRT

myRT report for GCA_002051965.1_ASM205196v1

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Seq: MYIS01000014.1 Salmonella enterica strain BCW_5848 NODE_14_length_129452_cov_3.40655, whole genome shotgun sequence (129452 bp)
Overview 1 RT 1: 59302-65427 bp Neighborhood of RT #1 [59302, 65609] PRK05658 PRK10201 RVT-UG11 5 Feature: gene Location: 59302-61284 bp Feature: domain Description: PRK05658 Location: 59440-61282 bp Feature: domain Description: PRK05658 Location: 59440-61 282 bp Feature: gene Location: 61408-61914 bp Feature: domain Description: PRK10201 Location: 61411-61909 bp Feature: domain Description: PRK1 0201 Location: 61 41 1 -61 909 bp Feature: gene Location: 62238-63002 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 62361-62814 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 62361 -6281 4 bp Feature: gene Location: 63612-63779 bp Feature: gene Location: 63909-65609 bp Feature: domain Description: 5 Location: 65133-65427 bp Feature: domain Description: 5 Location: 651 33-65427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10201 (G/U mismatch-specific DNA glycosylase), RVT-UG11, 5 (PHA02596)

Seq: MYIS01000001.1 Salmonella enterica strain BCW_5848 NODE_1_length_464483_cov_3.59216, whole genome shotgun sequence (464483 bp)
Overview 1 RT 1: 414658-419583 bp Neighborhood of RT #1 [414658, 419591] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 414658-415380 bp Feature: domain Description: INT_P4_C Location: 414778-415309 bp Feature: domain Description: INT_P4_C Location: 414778-415309 bp Feature: gene Location: 415705-416667 bp Feature: gene Location: 416667-417602 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 416778-417363 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 416778-417363 bp Feature: gene Location: 417850-418059 bp Feature: gene Location: 418404-419591 bp Feature: domain Description: PRK10473 Location: 418407-419583 bp Feature: domain Description: PRK10473 Location: 418407-419583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)