myRT

myRT report for GCA_002052175.1_ASM205217v1

Download annotations/find similar RTs

Seq: MYJC01000011.1 Salmonella enterica strain BCW_5838 NODE_11_length_139183_cov_2.06476, whole genome shotgun sequence (139183 bp)
Overview 1 RT 1: 44591-48767 bp Neighborhood of RT #1 [44591, 48767] PRK10473 RVT-Retrons Feature: gene Location: 44591-45778 bp Feature: domain Description: PRK10473 Location: 44594-45770 bp Feature: domain Description: PRK1 0473 Location: 44594-45770 bp Feature: gene Location: 46123-46332 bp Feature: gene Location: 46580-47515 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46691-47276 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46691 -47276 bp Feature: gene Location: 47515-48477 bp Feature: gene Location: 48504-48767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons

Seq: MYJC01000005.1 Salmonella enterica strain BCW_5838 NODE_5_length_204846_cov_1.92938, whole genome shotgun sequence (204846 bp)
Overview 1 RT 1: 63664-69969 bp Neighborhood of RT #1 [63664, 69971] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 63664-65364 bp Feature: domain Description: 5 Location: 64888-65182 bp Feature: domain Description: 5 Location: 64888-65182 bp Feature: gene Location: 65494-65661 bp Feature: gene Location: 66271-67035 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 66394-66847 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 66394-66847 bp Feature: gene Location: 67359-67865 bp Feature: domain Description: PRK10201 Location: 67362-67860 bp Feature: domain Description: PRK102 01 Location: 67362 -67860 bp Feature: gene Location: 67989-69971 bp Feature: domain Description: PRK05658 Location: 68127-69969 bp Feature: domain Description: PRK05658 Location: 6812 7-69969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)