myRT

myRT report for GCA_002053755.1_ASM205375v1

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Seq: MYMQ01000177.1 Salmonella enterica strain BCW_4956 NODE_177_length_6684_cov_8.04425, whole genome shotgun sequence (6684 bp)
Overview 1 RT 1: 2-5123 bp Neighborhood of RT #1 [2, 5125] RVT-Retrons TIR_2 Prim_Zn_Ribbon COG3378 DUF5375 Feature: gene Location: 2-187 bp Feature: gene Location: 237-1868 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 552-1149 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 552-1 1 49 bp Feature: domain Description: TIR_2 Location: 1473-1833 bp Feature: domain Description: TIR_2 Location: 1 473-1 833 bp Feature: gene Location: 2457-4790 bp Feature: domain Description: Prim_Zn_Ribbon Location: 2547-2655 bp Feature: domain Description: Prim_Zn_Ribbon Location: 2547-2655 bp Feature: domain Description: COG3378 Location: 3273-4782 bp Feature: domain Description: COG3378 Location: 3273-4782 bp Feature: gene Location: 4805-5125 bp Feature: domain Description: DUF5375 Location: 4808-5123 bp Feature: domain Description: DUF5375 Location: 4808-51 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), DUF5375 (pfam17345)

Seq: MYMQ01000056.1 Salmonella enterica strain BCW_4956 NODE_56_length_12071_cov_10.613, whole genome shotgun sequence (12071 bp)
Overview 1 RT 1: 501-4217 bp Neighborhood of RT #1 [501, 4228] RVT-UG11 Prim_Zn_Ribbon COG3378 Feature: gene Location: 501-1274 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 636-1089 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 636-1089 bp Feature: gene Location: 1462-1680 bp Feature: gene Location: 1895-4228 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1985-2093 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1985-2 093 bp Feature: domain Description: COG3378 Location: 2705-4217 bp Feature: domain Description: COG3378 Location: 2 705-42 17 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase )