myRT

myRT report for GCA_002053775.1_ASM205377v1

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Seq: MYMR01000054.1 Salmonella enterica strain BCW_4955 NODE_54_length_13557_cov_14.5483, whole genome shotgun sequence (13557 bp)
Overview 1 RT 1: 7784-13321 bp Neighborhood of RT #1 [7784, 13341] Prim_Zn_Ribbon COG3378 RVT-Retrons TIR_2 HTH_Tnp_1 HTH_Hin_like Feature: gene Location: 7784-10117 bp Feature: domain Description: Prim_Zn_Ribbon Location: 7874-7982 bp Feature: domain Description: Prim_Zn_Ribbon Location: 7874-7982 bp Feature: domain Description: COG3378 Location: 8600-10109 bp Feature: domain Description: COG3378 Location: 8600-1 01 09 bp Feature: gene Location: 10434-10625 bp Feature: gene Location: 10706-12337 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11021-11618 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 021 -1 1 61 8 bp Feature: domain Description: TIR_2 Location: 11942-12302 bp Feature: domain Description: TIR_2 Location: 1 1 942-1 2302 bp Feature: gene Location: 12387-12824 bp Feature: domain Description: HTH_Tnp_1 Location: 12402-12519 bp Feature: domain Description: HTH_Tnp_1 Location: 1 2402-1 251 9 bp Feature: gene Location: 13210-13341 bp Feature: domain Description: HTH_Hin_like Location: 13216-13321 bp Feature: domain Description: HTH_Hin_like Location: 1 321 6-1 3321 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676), HTH_Tnp_1 (pfam01527), HTH_Hin_like (cd00569), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase )