myRT

myRT report for GCA_002057565.1_ASM205756v1

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Seq: MYQE01000001.1 Salmonella enterica strain BCW_4842 NODE_1_length_505077_cov_3.61519, whole genome shotgun sequence (505077 bp)
Overview 1 RT 1: 419645-421981 bp Neighborhood of RT #1 [419645, 421981] RVT-Retrons HTH_XRE Feature: gene Location: 419645-419839 bp Feature: gene Location: 419838-420269 bp Feature: gene Location: 420409-421359 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 420589-421132 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 420589-421 1 32 bp Feature: gene Location: 421337-421645 bp Feature: domain Description: HTH_XRE Location: 421349-421514 bp Feature: domain Description: HTH_XRE Location: 421 349-421 51 4 bp Feature: gene Location: 421682-421981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530)

Seq: MYQE01000020.1 Salmonella enterica strain BCW_4842 NODE_20_length_65789_cov_3.70228, whole genome shotgun sequence (65789 bp)
Overview 1 RT 1: 57660-61900 bp Neighborhood of RT #1 [57660, 61983] DUF4756 RVT-Retrons HTH_23 DDE_3 Feature: gene Location: 57660-58061 bp Feature: domain Description: DUF4756 Location: 57663-58059 bp Feature: domain Description: DUF4756 Location: 57663-58059 bp Feature: gene Location: 58580-59539 bp Feature: gene Location: 59856-60809 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60012-60561 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60012 -60561 bp Feature: gene Location: 60952-61356 bp Feature: domain Description: HTH_23 Location: 61045-61171 bp Feature: domain Description: HTH_2 3 Location: 61045-61171 bp Feature: gene Location: 61363-61983 bp Feature: domain Description: DDE_3 Location: 61483-61900 bp Feature: domain Description: DDE_3 Location: 61483-61900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4756 (pfam15948), RVT-Retrons, HTH_23 (pfam13384), DDE_3 (pfam13358)