myRT

myRT report for GCA_002058105.1_ASM205810v1

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Seq: MYSX01000198.1 Salmonella enterica subsp. enterica serovar Newport strain BCW_4361 NODE_198_length_7837_cov_4.21214, whole genome shotgun sequence (7837 bp)
Overview 1 RT 1: 3352-7834 bp Neighborhood of RT #1 [3352, 7834] PRK05658 PRK10201 RVT-UG11 Feature: gene Location: 3352-5334 bp Feature: domain Description: PRK05658 Location: 3490-5332 bp Feature: domain Description: PRK05658 Location: 3490-5332 bp Feature: gene Location: 5458-5964 bp Feature: domain Description: PRK10201 Location: 5461-5959 bp Feature: domain Description: PRK1 0201 Location: 5461 -5959 bp Feature: gene Location: 6288-7052 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 6411-6864 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 641 1 -6864 bp Feature: gene Location: 7691-7834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10201 (G/U mismatch-specific DNA glycosylase), RVT-UG11

Seq: MYSX01000003.1 Salmonella enterica subsp. enterica serovar Newport strain BCW_4361 NODE_3_length_51687_cov_6.43926, whole genome shotgun sequence (51687 bp)
Overview 1 RT 1: 29481-31984 bp Neighborhood of RT #1 [29481, 32010] CbeA_antitoxin RVT-GII GIIM CbeA_antitoxin DUF987 Feature: gene Location: 29481-29675 bp Feature: domain Description: CbeA_antitoxin Location: 29601-29658 bp Feature: domain Description: CbeA_antitoxin Location: 2 9601-2 9658 bp Feature: gene Location: 29716-30066 bp Feature: gene Location: 30093-31334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30300-30957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30300-30957 bp Feature: domain Description: GIIM Note: maturase Location: 31038-31260 bp Feature: domain Description: GIIM Note: maturase Location: 31038-312 60 bp Feature: gene Location: 31371-31775 bp Feature: domain Description: CbeA_antitoxin Location: 31482-31728 bp Feature: domain Description: CbeA_antitoxin Location: 31482 -3172 8 bp Feature: gene Location: 31789-32010 bp Feature: domain Description: DUF987 Location: 31792-31984 bp Feature: domain Description: DUF987 Location: 31792 -31984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbeA_antitoxin (pfam06154), RVT-GII, GIIM (pfam08388), DUF987 (pfam06174)