myRT

myRT report for GCA_002059445.1_ASM205944v1

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Seq: MXQQ01000014.1 Salmonella enterica strain BCW_3999 NODE_14_length_145142_cov_4.18335, whole genome shotgun sequence (145142 bp)
Overview 1 RT 1: 1536-7451 bp Neighborhood of RT #1 [1536, 7451] DUF5375 Prim_Zn_Ribbon COG3378 RVT-Retrons TIR_2 HTH_Tnp_1 Feature: gene Location: 1536-1856 bp Feature: domain Description: DUF5375 Location: 1539-1854 bp Feature: domain Description: DUF5375 Location: 1 539-1 854 bp Feature: gene Location: 1871-4204 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1961-2069 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1 961 -2069 bp Feature: domain Description: COG3378 Location: 2678-4193 bp Feature: domain Description: COG3378 Location: 2678-41 93 bp Feature: gene Location: 4793-6424 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5108-5705 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51 08-5705 bp Feature: domain Description: TIR_2 Location: 6029-6389 bp Feature: domain Description: TIR_2 Location: 6029-6389 bp Feature: gene Location: 6502-6912 bp Feature: domain Description: HTH_Tnp_1 Location: 6517-6634 bp Feature: domain Description: HTH_Tnp_1 Location: 651 7-6634 bp Feature: gene Location: 7293-7451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5375 (pfam17345), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), RVT-Retrons, TIR_2 (pfam13676), HTH_Tnp_1 (pfam01527)