myRT

myRT report for GCA_002059875.1_ASM205987v1

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Seq: MXRU01000150.1 Salmonella enterica subsp. enterica serovar Thompson strain BCW_3967 NODE_150_length_7915_cov_1.66671, whole genome shotgun sequence (7915 bp)
Overview 1 RT 1: 2356-6527 bp Neighborhood of RT #1 [2356, 6547] Tra5 TIR-like RVT-Retrons PHA02517 Feature: gene Location: 2356-2979 bp Feature: domain Description: Tra5 Location: 2377-2938 bp Feature: domain Description: Tra5 Location: 2377-2938 bp Feature: gene Location: 3234-4094 bp Feature: domain Description: TIR-like Location: 3660-4014 bp Feature: domain Description: TIR-like Location: 3660-401 4 bp Feature: gene Location: 4123-5082 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4303-4825 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4303-4825 bp Feature: gene Location: 5113-5340 bp Feature: gene Location: 5708-6547 bp Feature: domain Description: PHA02517 Location: 5732-6527 bp Feature: domain Description: PHA0251 7 Location: 5732-6527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), TIR-like (pfam10137), RVT-Retrons, PHA02517 (putative transposase OrfB; Reviewed)

Seq: MXRU01000051.1 Salmonella enterica subsp. enterica serovar Thompson strain BCW_3967 NODE_51_length_37003_cov_1.69905, whole genome shotgun sequence (37003 bp)
Overview 1 RT 1: 109-2542 bp Neighborhood of RT #1 [109, 2550] RVT-Retrons PRK10473 Feature: gene Location: 109-561 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 115-322 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 115-32 2 bp Feature: gene Location: 809-1018 bp Feature: gene Location: 1363-2550 bp Feature: domain Description: PRK10473 Location: 1366-2542 bp Feature: domain Description: PRK10473 Location: 1366-2 542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)