myRT

myRT report for GCA_002060875.1_ASM206087v1

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Seq: MXUX01000020.1 Salmonella enterica strain BCW_3055 NODE_20_length_88398_cov_1.86918, whole genome shotgun sequence (88398 bp)
Overview 1 RT 1: 61629-69639 bp Neighborhood of RT #1 [61629, 69639] GanA Transposase_mut Transposase_20 RVT-GII GIIM Phage_int_SAM_4 INT_RitA_C_like Phage_int_SAM_1 INT_RitC_C_like RVT_N RVT-GII Feature: gene Location: 61629-63677 bp Feature: domain Description: GanA Location: 61662-63672 bp Feature: domain Description: GanA Location: 61 662-63672 bp Feature: gene Location: 63826-64362 bp Feature: domain Description: Transposase_mut Location: 63865-64039 bp Feature: domain Description: Transposase_mut Location: 63865-64039 bp Feature: domain Description: Transposase_20 Location: 64045-64231 bp Feature: domain Description: Transposase_20 Location: 64045-64231 bp Feature: gene Location: 64495-65232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64525-64711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64525-6471 1 bp Feature: domain Description: GIIM Note: maturase Location: 64765-64999 bp Feature: domain Description: GIIM Note: maturase Location: 64765-64999 bp Feature: gene Location: 65287-65418 bp Feature: gene Location: 65421-66323 bp Feature: domain Description: Phage_int_SAM_4 Location: 65763-65982 bp Feature: domain Description: Phage_int_SAM_4 Location: 65763-65982 bp Feature: domain Description: INT_RitA_C_like Location: 65994-66288 bp Feature: domain Description: INT_RitA_C_like Location: 65994-66288 bp Feature: gene Location: 67290-67610 bp Feature: domain Description: Phage_int_SAM_1 Location: 67335-67578 bp Feature: domain Description: Phage_int_SAM_1 Location: 67335-67578 bp Feature: gene Location: 67690-68247 bp Feature: domain Description: INT_RitC_C_like Location: 67693-68167 bp Feature: domain Description: INT_RitC_C_like Location: 67693-681 67 bp Feature: gene Location: 68297-68968 bp Feature: domain Description: RVT_N Location: 68300-68492 bp Feature: domain Description: RVT_N Location: 68300-68492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68537-68912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68537-6891 2 bp Feature: gene Location: 69058-69345 bp Feature: gene Location: 69394-69639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GanA (COG1874), Transposase_mut (pfam00872), Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388), Phage_int_SAM_4 (pfam13495), INT_RitA_C_like (cd01188), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), RVT_N (pfam13655)

Seq: MXUX01000069.1 Salmonella enterica strain BCW_3055 NODE_69_length_9708_cov_1.88068, whole genome shotgun sequence (9708 bp)
Overview 1 RT 1: 187-4964 bp Neighborhood of RT #1 [187, 4964] PRK15223 RVT-UG4 Feature: gene Location: 187-2715 bp Feature: domain Description: PRK15223 Location: 214-2713 bp Feature: domain Description: PRK152 2 3 Location: 2 14-2 713 bp Feature: gene Location: 2732-3709 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3089-3536 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3089-3536 bp Feature: gene Location: 3755-4225 bp Feature: gene Location: 4596-4964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15223 (fimbrial biogenesis outer membrane usher protein), RVT-UG4