myRT

myRT report for GCA_002061145.1_ASM206114v1

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Seq: MXRC01000014.1 Salmonella enterica subsp. enterica serovar Poona strain BCW_3986 NODE_14_length_125776_cov_2.91809, whole genome shotgun sequence (125776 bp)
Overview 1 RT 1: 7357-13248 bp Neighborhood of RT #1 [7357, 13250] HTH_Hin_like HTH_Tnp_1 RVT-Retrons TIR_2 Prim_Zn_Ribbon COG3378 DUF5375 Feature: gene Location: 7357-7488 bp Feature: domain Description: HTH_Hin_like Location: 7363-7468 bp Feature: domain Description: HTH_Hin_like Location: 7363-7468 bp Feature: gene Location: 7874-8143 bp Feature: domain Description: HTH_Tnp_1 Location: 7889-8006 bp Feature: domain Description: HTH_Tnp_1 Location: 7889-8006 bp Feature: gene Location: 8362-9993 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8677-9274 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8677-9274 bp Feature: domain Description: TIR_2 Location: 9598-9958 bp Feature: domain Description: TIR_2 Location: 9598-9958 bp Feature: gene Location: 10582-12915 bp Feature: domain Description: Prim_Zn_Ribbon Location: 10672-10780 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1 0672-1 0780 bp Feature: domain Description: COG3378 Location: 11398-12907 bp Feature: domain Description: COG3378 Location: 1 1 398-1 2907 bp Feature: gene Location: 12930-13250 bp Feature: domain Description: DUF5375 Location: 12933-13248 bp Feature: domain Description: DUF5375 Location: 1 2933-1 3248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), DUF5375 (pfam17345), HTH_Hin_like (cd00569), HTH_Tnp_1 (pfam01527), RVT-Retrons, TIR_2 (pfam13676)