myRT

myRT report for GCA_002061615.1_ASM206161v1

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Seq: MXTD01000057.1 Salmonella enterica subsp. enterica serovar Typhimurium strain NCTR-SF488 NODE_57_length_20473_cov_1.41543, whole genome shotgun sequence (20473 bp)
Overview 1 RT 1: 3817-9188 bp Neighborhood of RT #1 [3817, 9193] HTH_Tnp_1 RVT-Retrons TIR_2 Prim_Zn_Ribbon COG3378 DUF5375 Feature: gene Location: 3817-4014 bp Feature: domain Description: HTH_Tnp_1 Location: 3832-3949 bp Feature: domain Description: HTH_Tnp_1 Location: 3832-3949 bp Feature: gene Location: 4030-4227 bp Feature: gene Location: 4305-5936 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4620-5217 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4620-521 7 bp Feature: domain Description: TIR_2 Location: 5541-5901 bp Feature: domain Description: TIR_2 Location: 5541 -5901 bp Feature: gene Location: 6525-8858 bp Feature: domain Description: Prim_Zn_Ribbon Location: 6615-6723 bp Feature: domain Description: Prim_Zn_Ribbon Location: 661 5-6723 bp Feature: domain Description: COG3378 Location: 7341-8850 bp Feature: domain Description: COG3378 Location: 7341 -8850 bp Feature: gene Location: 8873-9193 bp Feature: domain Description: DUF5375 Location: 8876-9188 bp Feature: domain Description: DUF5375 Location: 8876-91 88 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-Retrons, TIR_2 (pfam13676), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), DUF5375 (pfam17345)