myRT

myRT report for GCA_002062335.1_ASM206233v1

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Seq: MXWP01000019.1 Salmonella enterica subsp. enterica serovar Poona strain BCW_2873 NODE_19_length_101358_cov_4.00993, whole genome shotgun sequence (101358 bp)
Overview 1 RT 1: 45675-48147 bp Neighborhood of RT #1 [45675, 48147] Adhesin_Dr RVT-UG4 Feature: gene Location: 45675-46133 bp Feature: gene Location: 46176-46784 bp Feature: domain Description: Adhesin_Dr Location: 46482-46764 bp Feature: domain Description: Adhesin_Dr Location: 46482-46764 bp Feature: gene Location: 47050-47541 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47161-47536 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 471 61 -47536 bp Feature: gene Location: 47581-47778 bp Feature: gene Location: 47872-48147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Adhesin_Dr (pfam04619), RVT-UG4

Seq: MXWP01000008.1 Salmonella enterica subsp. enterica serovar Poona strain BCW_2873 NODE_8_length_183088_cov_2.37656, whole genome shotgun sequence (183088 bp)
Overview 1 RT 1: 112518-118390 bp Neighborhood of RT #1 [112518, 118410] DUF5375 Prim_Zn_Ribbon COG3378 RVT-Retrons TIR_2 HTH_Tnp_1 HTH_Hin_like Feature: gene Location: 112518-112838 bp Feature: domain Description: DUF5375 Location: 112521-112836 bp Feature: domain Description: DUF5375 Location: 112 52 1-112 836 bp Feature: gene Location: 112853-115186 bp Feature: domain Description: Prim_Zn_Ribbon Location: 112943-113051 bp Feature: domain Description: Prim_Zn_Ribbon Location: 112 943-113051 bp Feature: domain Description: COG3378 Location: 113669-115178 bp Feature: domain Description: COG3378 Location: 113669-115178 bp Feature: gene Location: 115775-117406 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116090-116687 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116090-116687 bp Feature: domain Description: TIR_2 Location: 117011-117371 bp Feature: domain Description: TIR_2 Location: 117011-117371 bp Feature: gene Location: 117456-117893 bp Feature: domain Description: HTH_Tnp_1 Location: 117471-117588 bp Feature: domain Description: HTH_Tnp_1 Location: 117471-117588 bp Feature: gene Location: 118279-118410 bp Feature: domain Description: HTH_Hin_like Location: 118285-118390 bp Feature: domain Description: HTH_Hin_like Location: 1182 85-118390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5375 (pfam17345), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), RVT-Retrons, TIR_2 (pfam13676), HTH_Tnp_1 (pfam01527), HTH_Hin_like (cd00569)