myRT

myRT report for GCA_002063195.1_ASM206319v1

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Seq: MXWG01000027.1 Salmonella enterica subsp. enterica serovar Brandenburg strain BCW_2883 NODE_27_length_51880_cov_2.15201, whole genome shotgun sequence (51880 bp)
Overview 1 RT 1: 43237-47477 bp Neighborhood of RT #1 [43237, 47560] DUF4756 RVT-Retrons HTH_23 DDE_3 Feature: gene Location: 43237-43638 bp Feature: domain Description: DUF4756 Location: 43240-43636 bp Feature: domain Description: DUF4756 Location: 43240-43636 bp Feature: gene Location: 44157-45116 bp Feature: gene Location: 45433-46386 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45589-46138 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45589-461 38 bp Feature: gene Location: 46529-46933 bp Feature: domain Description: HTH_23 Location: 46622-46748 bp Feature: domain Description: HTH_23 Location: 46622-46748 bp Feature: gene Location: 46940-47560 bp Feature: domain Description: DDE_3 Location: 47060-47477 bp Feature: domain Description: DDE_3 Location: 47060-47477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4756 (pfam15948), RVT-Retrons, HTH_23 (pfam13384), DDE_3 (pfam13358)

Seq: MXWG01000032.1 Salmonella enterica subsp. enterica serovar Brandenburg strain BCW_2883 NODE_32_length_48557_cov_1.66443, whole genome shotgun sequence (48557 bp)
Overview 1 RT 1: 12664-15000 bp Neighborhood of RT #1 [12664, 15000] RVT-Retrons HTH_XRE Feature: gene Location: 12664-12858 bp Feature: gene Location: 12857-13288 bp Feature: gene Location: 13428-14378 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13608-14151 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13608-14151 bp Feature: gene Location: 14356-14664 bp Feature: domain Description: HTH_XRE Location: 14368-14533 bp Feature: domain Description: HTH_XRE Location: 14368-14533 bp Feature: gene Location: 14701-15000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530)