myRT

myRT report for GCA_002064595.1_ASM206459v1

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Seq: MYBO01000026.1 Salmonella enterica subsp. enterica serovar Kentucky strain BCW_2722 NODE_26_length_49302_cov_4.13992, whole genome shotgun sequence (49302 bp)
Overview 1 RT 1: 44428-46733 bp Neighborhood of RT #1 [44428, 46813] RVT-Retrons TIR-like Feature: gene Location: 44428-44559 bp Feature: gene Location: 44706-44933 bp Feature: gene Location: 44964-45923 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45144-45666 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 451 44-45666 bp Feature: gene Location: 45973-46350 bp Feature: gene Location: 46289-46813 bp Feature: domain Description: TIR-like Location: 46379-46733 bp Feature: domain Description: TIR-like Location: 46379-46733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR-like (pfam10137)

Seq: MYBO01000007.1 Salmonella enterica subsp. enterica serovar Kentucky strain BCW_2722 NODE_7_length_226792_cov_4.3464, whole genome shotgun sequence (226792 bp)
Overview 1 RT 1: 160600-167453 bp Neighborhood of RT #1 [160600, 167455] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 160600-161145 bp Feature: gene Location: 161148-162848 bp Feature: domain Description: 5 Location: 162372-162666 bp Feature: domain Description: 5 Location: 162 372 -162 666 bp Feature: gene Location: 163755-164519 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 163878-164331 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 163878-164331 bp Feature: gene Location: 164843-165349 bp Feature: domain Description: PRK10201 Location: 164846-165344 bp Feature: domain Description: PRK102 01 Location: 164846-165344 bp Feature: gene Location: 165473-167455 bp Feature: domain Description: PRK05658 Location: 165611-167453 bp Feature: domain Description: PRK05658 Location: 165611-167453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)