myRT

myRT report for GCA_002065205.1_ASM206520v1

Download annotations/find similar RTs

Seq: MYAD01000002.1 Salmonella enterica subsp. enterica serovar Poona strain BCW_2761 NODE_2_length_133061_cov_5.05012, whole genome shotgun sequence (133061 bp)
Overview 1 RT 1: 119183-125055 bp Neighborhood of RT #1 [119183, 125075] DUF5375 Prim_Zn_Ribbon COG3378 RVT-Retrons TIR_2 HTH_Tnp_1 HTH_Hin_like Feature: gene Location: 119183-119503 bp Feature: domain Description: DUF5375 Location: 119186-119501 bp Feature: domain Description: DUF5375 Location: 1 1 91 86-1 1 9501 bp Feature: gene Location: 119518-121851 bp Feature: domain Description: Prim_Zn_Ribbon Location: 119608-119716 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1 1 9608-1 1 971 6 bp Feature: domain Description: COG3378 Location: 120334-121843 bp Feature: domain Description: COG3378 Location: 1 20334-1 21 843 bp Feature: gene Location: 122440-124071 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 122755-123352 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 22755-1 23352 bp Feature: domain Description: TIR_2 Location: 123676-124036 bp Feature: domain Description: TIR_2 Location: 1 23676-1 24036 bp Feature: gene Location: 124121-124558 bp Feature: domain Description: HTH_Tnp_1 Location: 124136-124253 bp Feature: domain Description: HTH_Tnp_1 Location: 1 241 36-1 24253 bp Feature: gene Location: 124944-125075 bp Feature: domain Description: HTH_Hin_like Location: 124950-125055 bp Feature: domain Description: HTH_Hin_like Location: 1 24950-1 25055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5375 (pfam17345), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), RVT-Retrons, TIR_2 (pfam13676), HTH_Tnp_1 (pfam01527), HTH_Hin_like (cd00569)

Seq: MYAD01000004.1 Salmonella enterica subsp. enterica serovar Poona strain BCW_2761 NODE_4_length_101400_cov_8.099, whole genome shotgun sequence (101400 bp)
Overview 1 RT 1: 45709-48181 bp Neighborhood of RT #1 [45709, 48181] Adhesin_Dr RVT-UG4 Feature: gene Location: 45709-46167 bp Feature: gene Location: 46210-46818 bp Feature: domain Description: Adhesin_Dr Location: 46516-46798 bp Feature: domain Description: Adhesin_Dr Location: 46516-46798 bp Feature: gene Location: 47084-47575 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47195-47570 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47195-47570 bp Feature: gene Location: 47615-47812 bp Feature: gene Location: 47906-48181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Adhesin_Dr (pfam04619), RVT-UG4