myRT

myRT report for GCA_002065215.1_ASM206521v1

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Seq: MYAE01000143.1 Salmonella enterica subsp. enterica serovar Pomona strain BCW_2760 NODE_143_length_1605_cov_4.04954, whole genome shotgun sequence (1605 bp)
Overview 1 RT 1: 31-1562 bp Neighborhood of RT #1 [31, 1562] RVT_N RVT-GII GIIM Feature: gene Location: 31-1197 bp Feature: domain Description: RVT_N Location: 37-130 bp Feature: domain Description: RVT_N Location: 37-1 30 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175-817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 75-81 7 bp Feature: domain Description: GIIM Note: maturase Location: 871-1102 bp Feature: domain Description: GIIM Note: maturase Location: 871 -1 1 02 bp Feature: gene Location: 1395-1562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MYAE01000180.1 Salmonella enterica subsp. enterica serovar Pomona strain BCW_2760 NODE_180_length_592_cov_3.08061, whole genome shotgun sequence (592 bp)
Overview 1 RT 1: 109-520 bp Neighborhood of RT #1 [109, 525] RVT-GII GIIM Feature: gene Location: 109-525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115-355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115-355 bp Feature: domain Description: GIIM Note: maturase Location: 406-520 bp Feature: domain Description: GIIM Note: maturase Location: 406-52 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MYAE01000198.1 Salmonella enterica subsp. enterica serovar Pomona strain BCW_2760 NODE_198_length_342_cov_17.0554, whole genome shotgun sequence (342 bp)
Overview 1 RT 1: 1-232 bp Neighborhood of RT #1 [1, 339] RVT-UG4 Feature: gene Location: 1-339 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4-232 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4-23 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: MYAE01000084.1 Salmonella enterica subsp. enterica serovar Pomona strain BCW_2760 NODE_84_length_9370_cov_5.02054, whole genome shotgun sequence (9370 bp)
Overview 1 RT 1: 203-2256 bp Neighborhood of RT #1 [203, 2256] RVT_N RVT-GII PRK13699 Feature: gene Location: 203-805 bp Feature: domain Description: RVT_N Location: 257-500 bp Feature: domain Description: RVT_N Location: 257-500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 545-734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54 5-734 bp Feature: gene Location: 1292-2035 bp Feature: domain Description: PRK13699 Location: 1427-2033 bp Feature: domain Description: PRK13699 Location: 14 27-2033 bp Feature: gene Location: 2035-2256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, PRK13699 (putative methylase; Provisional)