myRT

myRT report for GCA_002065495.1_ASM206549v1

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Seq: MYBQ01000016.1 Salmonella enterica subsp. enterica serovar Kentucky strain KS 6 NODE_16_length_49080_cov_4.19712, whole genome shotgun sequence (49080 bp)
Overview 1 RT 1: 2026-5295 bp Neighborhood of RT #1 [2026, 5306] TIR-like RVT-Retrons InsE Feature: gene Location: 2026-2400 bp Feature: gene Location: 2466-3326 bp Feature: domain Description: TIR-like Location: 2892-3246 bp Feature: domain Description: TIR-like Location: 2892-3246 bp Feature: gene Location: 3355-4314 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3535-4057 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3535-4057 bp Feature: gene Location: 4345-4572 bp Feature: gene Location: 5004-5306 bp Feature: domain Description: InsE Location: 5013-5295 bp Feature: domain Description: InsE Location: 501 3-5295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR-like (pfam10137), RVT-Retrons, InsE (COG2963)

Seq: MYBQ01000005.1 Salmonella enterica subsp. enterica serovar Kentucky strain KS 6 NODE_5_length_70228_cov_4.75596, whole genome shotgun sequence (70228 bp)
Overview 1 RT 1: 1558-7683 bp Neighborhood of RT #1 [1558, 7865] PRK05658 PRK10201 RVT-UG11 5 Feature: gene Location: 1558-3540 bp Feature: domain Description: PRK05658 Location: 1696-3538 bp Feature: domain Description: PRK05658 Location: 1696-3538 bp Feature: gene Location: 3664-4170 bp Feature: domain Description: PRK10201 Location: 3667-4165 bp Feature: domain Description: PRK102 01 Location: 3667-4165 bp Feature: gene Location: 4494-5258 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4617-5070 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4617-5070 bp Feature: gene Location: 5868-6035 bp Feature: gene Location: 6165-7865 bp Feature: domain Description: 5 Location: 7389-7683 bp Feature: domain Description: 5 Location: 7389-7683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10201 (G/U mismatch-specific DNA glycosylase), RVT-UG11, 5 (PHA02596)