myRT

myRT report for GCA_002066715.1_ASM206671v1

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Seq: MYEK01000158.1 Salmonella enterica subsp. enterica serovar Abaetetuba strain 1350/12 NODE_158_length_722_cov_4.33959, whole genome shotgun sequence (722 bp)
Overview 1 RT 1: 120-531 bp Neighborhood of RT #1 [120, 536] RVT-GII GIIM Feature: gene Location: 120-536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 26-366 bp Feature: domain Description: GIIM Note: maturase Location: 417-531 bp Feature: domain Description: GIIM Note: maturase Location: 41 7-531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MYEK01000061.1 Salmonella enterica subsp. enterica serovar Abaetetuba strain 1350/12 NODE_61_length_25752_cov_3.23215, whole genome shotgun sequence (25752 bp)
Overview 1 RT 1: 22611-25539 bp Neighborhood of RT #1 [22611, 25670] HOK_GEF RVT_N RVT-GII GIIM Feature: gene Location: 22611-23258 bp Feature: gene Location: 23537-23707 bp Feature: domain Description: HOK_GEF Location: 23549-23672 bp Feature: domain Description: HOK_GEF Location: 2 3549-2 3672 bp Feature: gene Location: 24273-25670 bp Feature: domain Description: RVT_N Location: 24324-24567 bp Feature: domain Description: RVT_N Location: 2 432 4-2 4567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24612-25254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4612 -2 52 54 bp Feature: domain Description: GIIM Note: maturase Location: 25308-25539 bp Feature: domain Description: GIIM Note: maturase Location: 2 5308-2 5539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HOK_GEF (pfam01848), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MYEK01000081.1 Salmonella enterica subsp. enterica serovar Abaetetuba strain 1350/12 NODE_81_length_12288_cov_4.63613, whole genome shotgun sequence (12288 bp)
Overview 1 RT 1: 10303-12276 bp Neighborhood of RT #1 [10303, 12287] PTS-II-BC-glcB RVT-UG4 Feature: gene Location: 10303-11481 bp Feature: domain Description: PTS-II-BC-glcB Location: 10324-11461 bp Feature: domain Description: PTS-II-BC-glcB Location: 103 24-11461 bp Feature: gene Location: 11532-11822 bp Feature: gene Location: 12000-12287 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 12045-12276 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 12045-12276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTS-II-BC-glcB (TIGR02002), RVT-UG4

Seq: MYEK01000086.1 Salmonella enterica subsp. enterica serovar Abaetetuba strain 1350/12 NODE_86_length_9450_cov_3.22494, whole genome shotgun sequence (9450 bp)
Overview 1 RT 1: 214-2267 bp Neighborhood of RT #1 [214, 2267] RVT_N RVT-GII PRK13699 Feature: gene Location: 214-816 bp Feature: domain Description: RVT_N Location: 268-511 bp Feature: domain Description: RVT_N Location: 268-511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 556-745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 556-74 5 bp Feature: gene Location: 1303-2046 bp Feature: domain Description: PRK13699 Location: 1438-2044 bp Feature: domain Description: PRK13699 Location: 14 38-204 4 bp Feature: gene Location: 2046-2267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, PRK13699 (putative methylase; Provisional)

Seq: MYEK01000088.1 Salmonella enterica subsp. enterica serovar Abaetetuba strain 1350/12 NODE_88_length_8982_cov_3.5159, whole genome shotgun sequence (8982 bp)
Overview 1 RT 1: 51-3698 bp Neighborhood of RT #1 [51, 3724] RVT-UG4 PRK13374 Feature: gene Location: 51-422 bp Feature: gene Location: 897-2159 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1305-1746 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1305 -1746 bp Feature: gene Location: 2240-3073 bp Feature: gene Location: 3098-3724 bp Feature: domain Description: PRK13374 Location: 3101-3698 bp Feature: domain Description: PRK13374 Location: 3101-3698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, PRK13374 (DeoD-type purine-nucleoside phosphorylase)