myRT

myRT report for GCA_002066815.1_ASM206681v1

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Seq: MYEU01000024.1 Salmonella enterica subsp. enterica serovar Typhimurium strain 6623 NODE_24_length_74862_cov_5.75266, whole genome shotgun sequence (74862 bp)
Overview 1 RT 1: 63836-70141 bp Neighborhood of RT #1 [63836, 70143] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 63836-65536 bp Feature: domain Description: 5 Location: 65060-65354 bp Feature: domain Description: 5 Location: 65060-65354 bp Feature: gene Location: 65666-65833 bp Feature: gene Location: 66443-67207 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 66566-67019 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 66566-6701 9 bp Feature: gene Location: 67531-68037 bp Feature: domain Description: PRK10201 Location: 67534-68032 bp Feature: domain Description: PRK1 0201 Location: 67534-68032 bp Feature: gene Location: 68161-70143 bp Feature: domain Description: PRK05658 Location: 68299-70141 bp Feature: domain Description: PRK05658 Location: 68299-701 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: MYEU01000028.1 Salmonella enterica subsp. enterica serovar Typhimurium strain 6623 NODE_28_length_61371_cov_5.48638, whole genome shotgun sequence (61371 bp)
Overview 1 RT 1: 11844-16769 bp Neighborhood of RT #1 [11844, 16777] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 11844-12566 bp Feature: domain Description: INT_P4_C Location: 11964-12495 bp Feature: domain Description: INT_P4_C Location: 11964-12 495 bp Feature: gene Location: 12891-13853 bp Feature: gene Location: 13853-14788 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13964-14549 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13964-14549 bp Feature: gene Location: 15036-15245 bp Feature: gene Location: 15590-16777 bp Feature: domain Description: PRK10473 Location: 15593-16769 bp Feature: domain Description: PRK10473 Location: 15593-16769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)