myRT

myRT report for GCA_002067115.1_ASM206711v1

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Seq: MVQC01000034.1 Methanoregulaceae archaeon PtaB.Bin009 A4E36_contig000034, whole genome shotgun sequence (42999 bp)
Overview 1 RT 1: 14231-20302 bp Neighborhood of RT #1 [14231, 20337] NrnB HDc Cas_VVA1548 RVT_N RVT-GII GIIM cas2 Cas1_I-II-III Feature: gene Location: 14231-16012 bp Feature: domain Description: NrnB Location: 14465-14666 bp Feature: domain Description: NrnB Location: 1 4465-1 4666 bp Feature: domain Description: HDc Location: 15353-15740 bp Feature: domain Description: HDc Location: 1 5353-1 5740 bp Feature: gene Location: 16114-16425 bp Feature: domain Description: Cas_VVA1548 Location: 16132-16396 bp Feature: domain Description: Cas_VVA1 548 Location: 1 61 32-1 6396 bp Feature: gene Location: 16561-18108 bp Feature: RT Description: RVT_N Location: 16639-16882 bp Feature: RT Description: RVT_N Location: 1 6639-1 6882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16927-17584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6927-1 7584 bp Feature: domain Description: GIIM Note: maturase Location: 17641-17860 bp Feature: domain Description: GIIM Note: maturase Location: 1 7641 -1 7860 bp Feature: gene Location: 19031-19318 bp Feature: domain Description: cas2 Location: 19043-19298 bp Feature: domain Description: cas2 Location: 1 9043-1 9298 bp Feature: gene Location: 19342-20337 bp Feature: domain Description: Cas1_I-II-III Location: 19357-20302 bp Feature: domain Description: Cas1 _I-II-III Location: 1 9357-20302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NrnB (COG2404), HDc (smart00471), Cas_VVA1548 (pfam09652), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), cas2 (TIGR01573), Cas1_I-II-III (cl00656)