myRT

myRT report for GCA_002067165.1_ASM206716v1

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Seq: MVQN01000161.1 Syntrophorhabdus sp. PtaB.Bin006 A4E58_contig000161, whole genome shotgun sequence (2344 bp)
Overview 1 RT 1: 1027-2058 bp Neighborhood of RT #1 [1027, 2303] PhdYeFM_antitox ParE_toxin RVT-GII GIIM Feature: gene Location: 1027-1308 bp Ori: OPX96068.1 Gene: relF Feature: domain Description: PhdYeFM_antitox Location: 1045-1252 bp Feature: domain Description: PhdYeFM_antitox Location: 1 045-1 252 bp Feature: gene Location: 1305-1640 bp Ori: OPX96069.1 Feature: domain Description: ParE_toxin Location: 1326-1593 bp Feature: domain Description: ParE_toxin Location: 1 326-1 593 bp Feature: gene Location: 1704-2303 bp Ori: OPX96070.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1710-1806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 0-1 806 bp Feature: domain Description: GIIM Note: maturase Location: 1848-2058 bp Feature: domain Description: GIIM Note: maturase Location: 1 848-2058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhdYeFM_antitox (pfam02604), ParE_toxin (pfam05016), RVT-GII, GIIM (pfam08388)

Seq: MVQN01000165.1 Syntrophorhabdus sp. PtaB.Bin006 A4E58_contig000165, whole genome shotgun sequence (12928 bp)
Overview 1 RT 1: 8921-12724 bp Neighborhood of RT #1 [8921, 12780] VapI HigB RVT-GII RVT-GII GIIM KOG2984 KOG2984 Transposase_mut Feature: gene Location: 8921-9226 bp Ori: OPX96000.1 Gene: ybaQ Feature: domain Description: VapI Location: 8927-9209 bp Feature: domain Description: VapI Location: 892 7-92 09 bp Feature: gene Location: 9236-9517 bp Ori: OPX96001.1 Gene: higB-1 Feature: domain Description: HigB Location: 9239-9515 bp Feature: domain Description: HigB Location: 92 39-9515 bp Feature: gene Location: 9881-10285 bp Ori: OPX96002.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10220-10283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 2 0-102 83 bp Feature: gene Location: 10471-11271 bp Ori: OPX96003.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10474-10834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10474-10834 bp Feature: domain Description: GIIM Note: maturase Location: 10876-11086 bp Feature: domain Description: GIIM Note: maturase Location: 10876-11086 bp Feature: gene Location: 11385-12002 bp Ori: OPX96004.1 Feature: domain Description: KOG2984 Location: 11607-11775 bp Feature: domain Description: KOG2 984 Location: 11607-11775 bp Feature: domain Description: KOG2984 Location: 11784-11982 bp Feature: domain Description: KOG2 984 Location: 11784-11982 bp Feature: gene Location: 12148-12780 bp Ori: OPX96005.1 Feature: domain Description: Transposase_mut Location: 12205-12724 bp Feature: domain Description: Transposase_mut Location: 12 2 05-12 72 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VapI (COG3093), HigB (COG4680), RVT-GII, GIIM (pfam08388), KOG2984 (KOG2984, Predicted hydrolase ), Transposase_mut (pfam00872)

Seq: MVQN01000099.1 Syntrophorhabdus sp. PtaB.Bin006 A4E58_contig000099, whole genome shotgun sequence (6441 bp)
Overview 1 RT 1: 2647-6057 bp Neighborhood of RT #1 [2647, 6057] RVT-GII GIIM Feature: gene Location: 2647-3075 bp Feature: gene Location: 3465-3599 bp Feature: gene Location: 4126-5436 bp Ori: OPX97788.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4402-5026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4402-5026 bp Feature: domain Description: GIIM Note: maturase Location: 5128-5338 bp Feature: domain Description: GIIM Note: maturase Location: 5128-53 3 8 bp Feature: gene Location: 5641-6057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)