myRT

myRT report for GCA_002067415.1_ASM206741v1

Download annotations/find similar RTs

Seq: MVRQ01000025.1 Syntrophorhabdus sp. PtaU1.Bin002 A4E62_contig000025, whole genome shotgun sequence (23508 bp)
Overview 1 RT 1: 17518-21364 bp Neighborhood of RT #1 [17518, 21399] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 17518-18462 bp Feature: gene Location: 18437-19204 bp Feature: gene Location: 19197-20123 bp Ori: OPY72516.1 Gene: ltrA_1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 19398-19995 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 9398-1 9995 bp Feature: gene Location: 20125-21123 bp Ori: OPY72517.1 Gene: cas1_1 Feature: domain Description: Cas1_I-II-III Location: 20134-21085 bp Feature: domain Description: Cas1 _I-II-III Location: 201 34-21 085 bp Feature: gene Location: 21127-21399 bp Ori: OPY72518.1 Gene: cas2_1 Feature: domain Description: Cas2_I_II_III Location: 21136-21364 bp Feature: domain Description: Cas2_I_II_III Location: 21 1 36-21 364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: MVRQ01000309.1 Syntrophorhabdus sp. PtaU1.Bin002 A4E62_contig000309, whole genome shotgun sequence (1881 bp)
Overview 1 RT 1: 298-1675 bp Neighborhood of RT #1 [298, 1773] RVT-GII GIIM Feature: gene Location: 298-741 bp Feature: gene Location: 946-1773 bp Ori: OPY61225.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 949-1363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 949-1363 bp Feature: domain Description: GIIM Note: maturase Location: 1465-1675 bp Feature: domain Description: GIIM Note: maturase Location: 1465-1675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)