myRT

myRT report for GCA_002067515.1_ASM206751v1

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Seq: MVQK01000008.1 Pelotomaculum sp. PtaB.Bin013 A4E52_contig000008, whole genome shotgun sequence (23779 bp)
Overview 1 RT 1: 83-2443 bp Neighborhood of RT #1 [83, 2481] RVT-GII GIIM spore_III_AA Feature: gene Location: 83-691 bp Ori: OPX91981.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98-254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98-254 bp Feature: domain Description: GIIM Note: maturase Location: 296-530 bp Feature: domain Description: GIIM Note: maturase Location: 296-530 bp Feature: gene Location: 904-1281 bp Feature: gene Location: 1462-2481 bp Ori: OPX91983.1 Feature: domain Description: spore_III_AA Location: 1600-2443 bp Feature: domain Description: spore_III_AA Location: 1 600-2443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), spore_III_AA (TIGR02858)

Seq: MVQK01000328.1 Pelotomaculum sp. PtaB.Bin013 A4E52_contig000329, whole genome shotgun sequence (3092 bp)
Overview 1 RT 1: 29-3021 bp Neighborhood of RT #1 [29, 3050] DUF4901 DUF4901 SLH RVT-GII Feature: gene Location: 29-1477 bp Ori: OPX80920.1 Feature: domain Description: DUF4901 Location: 50-359 bp Feature: domain Description: DUF4901 Location: 50-359 bp Feature: domain Description: DUF4901 Location: 524-1220 bp Feature: domain Description: DUF4901 Location: 52 4-12 2 0 bp Feature: domain Description: SLH Location: 1259-1379 bp Feature: domain Description: SLH Location: 12 59-1379 bp Feature: gene Location: 2070-3050 bp Ori: OPX80921.1 Gene: ltrA_5 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2343-3021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 343-302 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4901 (pfam16244), SLH (pfam00395), RVT-GII

Seq: MVQK01000057.1 Pelotomaculum sp. PtaB.Bin013 A4E52_contig000057, whole genome shotgun sequence (10303 bp)
Overview 1 RT 1: 7906-10244 bp Neighborhood of RT #1 [7906, 10255] PRK00529 zf-ACC zf-ACC RVT-GII Feature: gene Location: 7906-8463 bp Ori: OPX89916.1 Gene: efp Feature: domain Description: PRK00529 Location: 7912-8461 bp Feature: domain Description: PRK00529 Location: 7912-8461 bp Feature: gene Location: 8550-9017 bp Ori: OPX89917.1 Feature: domain Description: zf-ACC Location: 8820-8850 bp Feature: domain Description: zf-ACC Location: 8820-8850 bp Feature: domain Description: zf-ACC Location: 8892-8931 bp Feature: domain Description: zf-ACC Location: 8892-893 1 bp Feature: gene Location: 9797-10255 bp Ori: OPX89918.1 Gene: ltrA_4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10010-10244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10010-10244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00529 (elongation factor P; Validated), zf-ACC (pfam17848), RVT-GII

Seq: MVQK01000018.1 Pelotomaculum sp. PtaB.Bin013 A4E52_contig000018, whole genome shotgun sequence (16838 bp)
Overview 1 RT 1: 14464-16766 bp Neighborhood of RT #1 [14464, 16795] T4SS-DNA_transf RVT-GII Feature: gene Location: 14464-14655 bp Feature: gene Location: 14642-15163 bp Ori: OPX91723.1 Feature: domain Description: T4SS-DNA_transf Location: 14966-15149 bp Feature: domain Description: T4 SS-DNA_transf Location: 14 966-1514 9 bp Feature: gene Location: 15908-16795 bp Ori: OPX91724.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16226-16766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16226-16766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), RVT-GII

Seq: MVQK01000038.1 Pelotomaculum sp. PtaB.Bin013 A4E52_contig000038, whole genome shotgun sequence (11999 bp)
Overview 1 RT 1: 7569-11916 bp Neighborhood of RT #1 [7569, 11993] Resolvase Recombinase RVT-GII RVT-GII GIIM Feature: gene Location: 7569-8456 bp Ori: OPX90847.1 Gene: tnpR_3 Feature: domain Description: Resolvase Location: 7623-8061 bp Feature: domain Description: Resolvase Location: 7623-8061 bp Feature: domain Description: Recombinase Location: 8133-8451 bp Feature: domain Description: Recombinase Location: 8133-845 1 bp Feature: gene Location: 8648-9310 bp Feature: gene Location: 9805-11094 bp Ori: OPX90849.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10060-10747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10060-10747 bp Feature: gene Location: 11292-11993 bp Ori: OPX90850.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11298-11592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11298-115 92 bp Feature: domain Description: GIIM Note: maturase Location: 11697-11916 bp Feature: domain Description: GIIM Note: maturase Location: 11697-11916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), RVT-GII, GIIM (pfam08388)