myRT

myRT report for GCA_002071935.1_ASM207193v1

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Seq: JYNA01000068.1 Burkholderia cenocepacia strain BC-41 contig_68, whole genome shotgun sequence (99082 bp)
Overview 1 RT 1: 1-6045 bp Neighborhood of RT #1 [1, 6045] RVT-GII GIIM COG3547 Feature: gene Location: 1-1135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-949 bp Feature: domain Description: GIIM Note: maturase Location: 1009-1129 bp Feature: domain Description: GIIM Note: maturase Location: 1 009-1 1 29 bp Feature: gene Location: 1563-2585 bp Feature: domain Description: COG3547 Location: 1578-2541 bp Feature: domain Description: COG3547 Location: 1 578-2541 bp Feature: gene Location: 3061-6045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: JYNA01000044.1 Burkholderia cenocepacia strain BC-41 contig_44, whole genome shotgun sequence (60867 bp)
Overview 1 RT 1: 57364-60861 bp Neighborhood of RT #1 [57364, 60867] YcbL-like_MBL-fold RlpA RVT-GII GIIM Feature: gene Location: 57364-58008 bp Feature: domain Description: YcbL-like_MBL-fold Location: 57376-57940 bp Feature: domain Description: YcbL-like_MBL-fold Location: 57376-57940 bp Feature: gene Location: 58664-59275 bp Feature: domain Description: RlpA Location: 58736-59240 bp Feature: domain Description: RlpA Location: 58736-592 40 bp Feature: gene Location: 59733-60867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60066-60681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60066-60681 bp Feature: domain Description: GIIM Note: maturase Location: 60741-60861 bp Feature: domain Description: GIIM Note: maturase Location: 60741-60861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YcbL-like_MBL-fold (cd07737), RlpA (COG0797), RVT-GII, GIIM (pfam08388)

Seq: JYNA01000002.1 Burkholderia cenocepacia strain BC-41 contig_2, whole genome shotgun sequence (220866 bp)
Overview 1 RT 1: 126660-131992 bp Neighborhood of RT #1 [126660, 132015] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 126660-127415 bp Feature: domain Description: his_ut_repres Location: 126738-127410 bp Feature: domain Description: his_ut_repres Location: 12673 8-127410 bp Feature: gene Location: 127651-128223 bp Feature: domain Description: FIN Location: 127837-128188 bp Feature: domain Description: FIN Location: 12783 7-128188 bp Feature: gene Location: 128477-129826 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 128942-129578 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 128942-129578 bp Feature: gene Location: 130152-130481 bp Feature: domain Description: Histone_HNS Location: 130173-130410 bp Feature: domain Description: Histone_HNS Location: 13 0173 -13 0410 bp Feature: gene Location: 130768-132015 bp Feature: domain Description: MFS_MucK Location: 130858-131992 bp Feature: domain Description: MFS_MucK Location: 13 0858-13 1992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)