myRT

myRT report for GCA_002071995.1_ASM207199v1

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Seq: JYMW01000102.1 Burkholderia cenocepacia strain BC-3 contig_102, whole genome shotgun sequence (1618 bp)
Overview 1 RT 1: 88-1297 bp Neighborhood of RT #1 [88, 1455] RVT-GII GIIM Feature: gene Location: 88-1455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421-1036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421 -1 036 bp Feature: domain Description: GIIM Note: maturase Location: 1096-1297 bp Feature: domain Description: GIIM Note: maturase Location: 1 096-1 297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JYMW01000073.1 Burkholderia cenocepacia strain BC-3 contig_73, whole genome shotgun sequence (70909 bp)
Overview 1 RT 1: 169-2769 bp Neighborhood of RT #1 [169, 2769] RVT-GII GIIM DHFR_1 Feature: gene Location: 169-1566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502-1120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502 -112 0 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1381 bp Feature: gene Location: 1652-2152 bp Feature: domain Description: DHFR_1 Location: 1664-2141 bp Feature: domain Description: DHFR_1 Location: 1664-2 141 bp Feature: gene Location: 2443-2769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DHFR_1 (pfam00186), RVT-GII, GIIM (pfam08388)

Seq: JYMW01000055.1 Burkholderia cenocepacia strain BC-3 contig_55, whole genome shotgun sequence (152130 bp)
Overview 1 RT 1: 20173-25522 bp Neighborhood of RT #1 [20173, 25527] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 20173-21420 bp Feature: domain Description: MFS_MucK Location: 20263-21397 bp Feature: domain Description: MFS_MucK Location: 20263 -213 97 bp Feature: gene Location: 21707-22036 bp Feature: domain Description: Histone_HNS Location: 21728-21965 bp Feature: domain Description: Histone_HNS Location: 21728-21965 bp Feature: gene Location: 22362-23711 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22827-23463 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22827-23 463 bp Feature: gene Location: 23965-24537 bp Feature: domain Description: FIN Location: 24151-24502 bp Feature: domain Description: FIN Location: 24151-24502 bp Feature: gene Location: 24772-25527 bp Feature: domain Description: his_ut_repres Location: 24850-25522 bp Feature: domain Description: his_ut_repres Location: 24850-25522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)