myRT

myRT report for GCA_002072955.1_ASM207295v1

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Seq: LPUF01000003.1 Methyloprofundus sedimenti strain WF1 Contig003, whole genome shotgun sequence (588402 bp) Associated domains: PRK15136 (multidrug efflux MFS transporter periplasmic adaptor subunit EmrA), UbiE (COG2226), RVT-GII, GIIM (pfam08388)

Seq: LPUF01000004.1 Methyloprofundus sedimenti strain WF1 Contig004, whole genome shotgun sequence (232440 bp) Associated domains: RVT-GII, COG5361 (Uncharacterized conserved protein )

Seq: LPUF01000005.1 Methyloprofundus sedimenti strain WF1 Contig005, whole genome shotgun sequence (94751 bp) Associated domains: RVT-GII, GIIM (pfam08388), Toluene_X (pfam03349)

Seq: LPUF01000002.1 Methyloprofundus sedimenti strain WF1 Contig002, whole genome shotgun sequence (391348 bp) Associated domains: Tex (COG2183), RVT-GII

Seq: LPUF01000001.1 Methyloprofundus sedimenti strain WF1 Contig001, whole genome shotgun sequence (2895801 bp) Associated domains: RVT-GII, GIIM (pfam08388), cysJ (TIGR01931), KOG0399 (KOG0399, Glutamate synthase ), Tra8 (COG2826), DUF1566 (pfam07603), DDE_Tnp_IS66 (pfam03050), SIR2_2 (pfam13289), Piwi_piwi-like_ProArk (cd04659), Zn_Tnp_IS91 (pfam14319)
Y2_Tnp (pfam04986), Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), PRK06133 (glutamate carboxypeptidase; Reviewed), CsdA (COG0520), PRK00230 (orotidine-5'-phosphate decarboxylase), PRK09776 (putative diguanylate cyclase; Provisional), Methyltransf_7 (pfam03492)
mltD (PRK10783), AmiC (COG0860), LysM (smart00257), Cupin_2 (pfam07883), cpxA (PRK09470), UbiE (COG2226), DOP1 (COG5221), COG5361 (Uncharacterized conserved protein ), YIH1 (COG1739), TrHb1_N (cd00454)
PRK11014 (HTH-type transcriptional repressor NsrR)