myRT

myRT report for GCA_002073095.1_ASM207309v1

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Seq: MVKQ01000035.1 Vibrio vulnificus strain VN-0101 chromosome 1 VN0101_CH1_contig_35, whole genome shotgun sequence (74620 bp)
Overview 1 RT 1: 38402-43994 bp 2 RT 2: 46578-55880 bp Neighborhood of RT #1 [38402, 43994] Ser_Recombinase Recombinase Zn_ribbon_recom RVT-Retrons Neighborhood of RT #2 [46578, 55888] Phage_GPA HATPase_c_3 HSDR_N_2 RVT-UG15 YpwA YpwA RhtB Feature: gene Location: 38402-40267 bp Ori: OQK51943.1 Feature: domain Description: Ser_Recombinase Location: 38441-38882 bp Feature: domain Description: Ser_Recombinase Location: 38441 -38882 bp Feature: domain Description: Recombinase Location: 39035-39305 bp Feature: domain Description: Recombinase Location: 39035-39305 bp Feature: domain Description: Zn_ribbon_recom Location: 39428-39602 bp Feature: domain Description: Zn_ribbon_recom Location: 39428-39602 bp Feature: gene Location: 40626-41942 bp Feature: gene Location: 42090-43229 bp Ori: OQK51945.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42330-42960 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42330-42960 bp Feature: gene Location: 43310-43609 bp Feature: gene Location: 43599-43994 bp Feature: gene Location: 46578-48377 bp Ori: OQK51950.1 Feature: domain Description: Phage_GPA Location: 47184-47835 bp Feature: domain Description: Phage_GPA Location: 471 84-47835 bp Feature: gene Location: 49574-51577 bp Ori: OQK51951.1 Feature: domain Description: HATPase_c_3 Location: 49640-49955 bp Feature: domain Description: HATPase_c_3 Location: 49640-49955 bp Feature: domain Description: HSDR_N_2 Location: 51089-51272 bp Feature: domain Description: HSDR_N_2 Location: 51 089-51 272 bp Feature: gene Location: 51710-53308 bp Ori: OQK51952.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 52121-52526 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 521 21 -52526 bp Feature: gene Location: 53476-55014 bp Ori: OQK51953.1 Feature: domain Description: YpwA Location: 53482-54697 bp Feature: domain Description: YpwA Location: 53482-54697 bp Feature: domain Description: YpwA Location: 54715-55012 bp Feature: domain Description: YpwA Location: 5471 5-5501 2 bp Feature: gene Location: 55253-55888 bp Ori: OQK51954.1 Feature: domain Description: RhtB Location: 55256-55880 bp Feature: domain Description: RhtB Location: 55256-55880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ser_Recombinase (cl02788), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-Retrons, Phage_GPA (pfam05840), HATPase_c_3 (pfam13589), HSDR_N_2 (pfam13588), RVT-UG15, YpwA (COG2317), RhtB (COG1280)