myRT

myRT report for GCA_002073105.1_ASM207310v1

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Seq: MVKR01000117.1 Vibrio vulnificus strain VN-0104 VN0104_U_contig_2, whole genome shotgun sequence (2170 bp)
Overview 1 RT 1: 586-1834 bp Neighborhood of RT #1 [586, 2058] RVT_N RVT-GII GIIM Feature: gene Location: 586-2058 bp Ori: OQK48009.1 Feature: domain Description: RVT_N Location: 634-877 bp Feature: domain Description: RVT_N Location: 634-877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922-1549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922-1 549 bp Feature: domain Description: GIIM Note: maturase Location: 1606-1834 bp Feature: domain Description: GIIM Note: maturase Location: 1 606-1 834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MVKR01000130.1 Vibrio vulnificus strain VN-0104 VN0104_U_contig_15, whole genome shotgun sequence (1938 bp)
Overview 1 RT 1: 79-1033 bp Neighborhood of RT #1 [79, 1134] RVT-GII GIIM Feature: gene Location: 79-1134 bp Ori: OQK47399.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82-745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 -745 bp Feature: domain Description: GIIM Note: maturase Location: 829-1033 bp Feature: domain Description: GIIM Note: maturase Location: 82 9-1033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MVKR01000101.1 Vibrio vulnificus strain VN-0104 chromosome 2 VN0104_CH2_contig_3, whole genome shotgun sequence (248976 bp)
Overview 1 RT 1: 40291-46747 bp Neighborhood of RT #1 [40291, 46752] arc_metj ParE RVT-UG12 KAP_NTPase KAP_NTPase PRK10477 Feature: gene Location: 40291-40575 bp Ori: OQK49980.1 Feature: domain Description: arc_metj Location: 40303-40420 bp Feature: domain Description: arc_metj Location: 403 03 -40420 bp Feature: gene Location: 40572-40850 bp Ori: OQK49981.1 Feature: domain Description: ParE Location: 40578-40845 bp Feature: domain Description: ParE Location: 40578-40845 bp Feature: gene Location: 40985-42541 bp Ori: OQK49982.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 41330-41771 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 413 3 0-41771 bp Feature: gene Location: 42695-44347 bp Ori: OQK49983.1 Feature: domain Description: KAP_NTPase Location: 42752-42851 bp Feature: domain Description: KAP_NTPase Location: 42752-42851 bp Feature: domain Description: KAP_NTPase Location: 42995-43220 bp Feature: domain Description: KAP_NTPase Location: 42995-43 220 bp Feature: gene Location: 46237-46752 bp Ori: OQK49984.1 Feature: domain Description: PRK10477 Location: 46270-46747 bp Feature: domain Description: PRK10477 Location: 46270-46747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT arc_metj (LOAD_arc_metj), ParE (COG3668), RVT-UG12, KAP_NTPase (pfam07693), PRK10477 (outer membrane lipoprotein Blc; Provisional)