myRT

myRT report for GCA_002075235.1_103414

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Seq: JZXI01000013.1 Escherichia coli strain 103414 103414_13, whole genome shotgun sequence (121782 bp)
Overview 1 RT 1: 24746-30676 bp Neighborhood of RT #1 [24746, 30861] AAA_23 Smc RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 24746-26572 bp Feature: domain Description: AAA_23 Location: 24800-25535 bp Feature: domain Description: AAA_23 Location: 24800-25535 bp Feature: domain Description: Smc Location: 25781-26072 bp Feature: domain Description: Smc Location: 25781 -26072 bp Feature: gene Location: 26740-27201 bp Feature: gene Location: 27624-28559 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27726-28326 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27726-28326 bp Feature: gene Location: 28556-30208 bp Feature: domain Description: COG3950 Location: 28754-30170 bp Feature: domain Description: COG3950 Location: 28754-301 70 bp Feature: gene Location: 30211-30861 bp Feature: domain Description: TIGR02646 Location: 30277-30676 bp Feature: domain Description: TIGR02646 Location: 30277-30676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), Smc (COG1196), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: JZXI01000043.1 Escherichia coli strain 103414 103414_43, whole genome shotgun sequence (32192 bp)
Overview 1 RT 1: 15429-19308 bp Neighborhood of RT #1 [15429, 19313] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 15429-16145 bp Feature: domain Description: rph Location: 15432-16140 bp Feature: domain Description: rph Location: 15432 -16140 bp Feature: gene Location: 16196-16852 bp Feature: domain Description: pyrE Location: 16214-16847 bp Feature: domain Description: pyrE Location: 162 14-16847 bp Feature: gene Location: 17149-18108 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17284-17833 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 172 84-17833 bp Feature: gene Location: 18152-18748 bp Feature: domain Description: slmA Location: 18158-18734 bp Feature: domain Description: slmA Location: 18158-18734 bp Feature: gene Location: 18855-19313 bp Feature: domain Description: dut Location: 18861-19308 bp Feature: domain Description: dut Location: 18861-19308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)